| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1912 |
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| Symbol | |
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| ID | 8225483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2349547 |
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| End bp | 2350953 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929757 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003086309 |
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| Protein GI | 255035688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGT TTAATATAAC TCTTATCCTG TTCGTCGCCC TGACATGGGC GGGATGCAAG
GTTTCGAAAA ACGTGCCGCT GCCGGATGCG GTACCGGGGG CATTCAGAAG TGCAGCGGCC
GGAGATTCTG CGGGCATCGG TGCCATTCCG TTCAGGACTT TCATTACCGA CCCGGCGCTG
CTGCAACTGA TCGATACGGC ATTAATTAAA AACTACGACA TGCAAATCGC GTTACAAAAC
ATCGATGCCG CCGAAGTGCT GTTCAAACAG GCCAGGCAGG GCTACCTGCC GGAGCTGAAA
GCGCAGCTGA CTGCCAATAC CAGCCGCCCT TCCGACAATA GTCTGAATGG TTTTACCCTG
AACCAGTTCC TGGGCACTTC GCACATCGAG GATTACAGCA CCGGGATGAC GGCAGTTTGG
GAAGCCGATA TCTGGGGCAA GATCCGCAGC CGCAAAGCTG CCGCGCTGGC GGGCTTTCTG
CAAACCGCAG AAGCGCGCAA AGCGCTGCAA ACGCAGCTGG TAGCGCAGGT CGCGCAGGGT
TATTACAATG TTTTAATGCT GGATGCGCAG CTGGAAGTCG CCCGGAAGAA CCTGATGCTC
AACGACAGTA CGCTGCGCAC TATACAATTG CAAGCGGTAG CCGGGCAGGT CACTTCACTG
GCGGTCCAGC AAGCCGAGGC GCAGCGGCTC ACTGCTTCCC AGCTCATTCC GCAGCTGGAA
GAGCAGGCCA CATTGCAGGA AAATGCATTG CATGTGCTGA TCGGGAAAAT GCCGCAGGCG
ATCAACCGCA AAAGCCGTTT GCAAGCATTG ACGATCCCGG AAGAACTGCA TGCAGGTTTT
CCATCTGCAT TGCTCAGCCG TCGGTCCGAT ATTAAAAGCG CTGAGCTGGC TTTGAATGCG
GCTAATGCCA AAGTGGGCGA GGCGCAGGCG AGTTTTTATC CTTCATTGGT GATCACAGCT
GGCGGCGGCA TCAATGCATT GAAAGCCAGC AACTGGTTCA ATATTCCCGC ATCGCTCTTC
GGACTGGTCG CGGGCAGCAT TACCCAGCCT GTTTTTCAGC GTGGACAATT AAAAGCGAAC
CTTGAAATAG CCAAAATAGA ACGTGAAAAA ACAGTGATTG CATTCCGGCA ATCGGTTCTC
CGGGCAGTAG GCGAAGTGTC GGACGAACTG ACCAAAGTGG AAAAGCTGAA AGCGCAATAC
CGCGCAGCCG CAGAACGGAC GCGCGTGCTG GAAACTGCTT CGCGCAATGC GAACCTGCCC
TTCAACCGTG GGATGGCCAA TTACTTGGAA GTCATTACGG CGCAAGGCAA CCTGCTGCAA
AGTGAGCTGC AACCGGCTAC CATTAAAACC CGGCAGTTGA ATGCGGTGGT CGGGCTGTAC
CGGTCGCTGG GGGGTGGGTG GAAGTGA
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| Protein sequence | MKQFNITLIL FVALTWAGCK VSKNVPLPDA VPGAFRSAAA GDSAGIGAIP FRTFITDPAL
LQLIDTALIK NYDMQIALQN IDAAEVLFKQ ARQGYLPELK AQLTANTSRP SDNSLNGFTL
NQFLGTSHIE DYSTGMTAVW EADIWGKIRS RKAAALAGFL QTAEARKALQ TQLVAQVAQG
YYNVLMLDAQ LEVARKNLML NDSTLRTIQL QAVAGQVTSL AVQQAEAQRL TASQLIPQLE
EQATLQENAL HVLIGKMPQA INRKSRLQAL TIPEELHAGF PSALLSRRSD IKSAELALNA
ANAKVGEAQA SFYPSLVITA GGGINALKAS NWFNIPASLF GLVAGSITQP VFQRGQLKAN
LEIAKIEREK TVIAFRQSVL RAVGEVSDEL TKVEKLKAQY RAAAERTRVL ETASRNANLP
FNRGMANYLE VITAQGNLLQ SELQPATIKT RQLNAVVGLY RSLGGGWK
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