Gene Dfer_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1880 
Symbol 
ID8225451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2318135 
End bp2318542 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID644929728 
Producttransposase 
Protein accessionYP_003086280 
Protein GI255035659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.999489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAC AAGACTTTAA GTGTTACAAG AAGCGTACTC AGAAAGATTA CAGTTTGGCC 
TTCAAACTAT CGATTGTGGA TGCAGTCGAA AAAGGTGAGT TGACCTACAA GCAAGCCCAG
CTCCGGCATG GCATTCAGGG AAGGAGTACT GTTTTGGTTT GGCTCAGAAA ACATGGTAGA
TTAGATTGGA AAGAATCTGA AACCATGAAA AAAGACACAC CCAATAAAAA GATCCGGGAA
CTGGAAAGGA AGCTGAAACG GCTTGAACAG GAAAAACATG TGCTTAATAC GGCCATCGAT
ATTGCTGACA GCCAGTTTGG TACCGACATC AGAAAAAAGT ATTTGAGCCT GTTGTCAGAA
GCTGCGGATC AGGCTCAAAA AGAGAGCGGC TCCCCGTCGG ATTCGTAG
 
Protein sequence
MEEQDFKCYK KRTQKDYSLA FKLSIVDAVE KGELTYKQAQ LRHGIQGRST VLVWLRKHGR 
LDWKESETMK KDTPNKKIRE LERKLKRLEQ EKHVLNTAID IADSQFGTDI RKKYLSLLSE
AADQAQKESG SPSDS