Gene Dfer_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1877 
Symbol 
ID8225448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2315417 
End bp2316349 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content40% 
IMG OID644929725 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003086277 
Protein GI255035656 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.175585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAT TATTCTCGAT CCTTCTCATT TTATTTGGCT GGTCGGCAGC TTGTTCACAG 
GCACTGTACA GCAGATCATT TGGGAATCCG AAACACCAGC CAATCATATT TTTACACGGT
GGGCCAGGAA GCAGCAGTGT TTACTTTGAA GCTACAACCG CAAAGTTACT TGCCGATAAG
GGATTTTTTG TGATCATTTA TGATCGACGG GGAGAAGGCC GCTCAAAGGA TAGTACTGCC
AAATTGAATT TTAATGAAGC ATTCGCTGAT TTGAGTGGCA TTTATAAAAA GTACAACCTA
AGGTATGCCA GTCTGATCGG ATTTAGCTTC GGCGGTTTGA TAGCAACTCA ATATGCTCAA
ATGCATCCTG GCATGGTCAG GGCAGTTGTG TTATGCAGTG CACTAATATC TCAGCAGAAA
TCGTATGAGA CGATATTGAG CAAAACAAGG ACGATTTATG AGCAAAGAAA GGACACGACA
AATTTGAACG AACTAACCGC CATTGCTCAA CTTAATCCTC GGTCTTTTGC ATACCGTACA
TTGGTTTTCA GACATGCGTC GGCAAATGGC TTTTTCACAC TTTCGGATCC TGATCACTTA
GCAAAACGTA TTTACGCCAC TTATAAAACG GATACACTAA TTAATAGCTA TCTGAGAAAT
GAATCGGCAG TACATACATT TTGGCAGAAT GAGAATCAAG TTAATATTGA TGTGACGCCT
ATCCTAAATA GTTTGAGAAA TGCAAACATG CCTATATTCG CATTATACGG GAAACAAGAC
GGACTTTATT CCGATGAGCA AGTAAGTGGA TTGAAATACC TGATTGGTAA TTCAAATGTT
AAATACCTTG ATCGATGTTC CCACACTGTC TTCATTGATC AACAGTCGTT GTTTCTGTCA
GCGCTAAGCA CATGGCTCAA AAAAGCTAAG TAA
 
Protein sequence
MKILFSILLI LFGWSAACSQ ALYSRSFGNP KHQPIIFLHG GPGSSSVYFE ATTAKLLADK 
GFFVIIYDRR GEGRSKDSTA KLNFNEAFAD LSGIYKKYNL RYASLIGFSF GGLIATQYAQ
MHPGMVRAVV LCSALISQQK SYETILSKTR TIYEQRKDTT NLNELTAIAQ LNPRSFAYRT
LVFRHASANG FFTLSDPDHL AKRIYATYKT DTLINSYLRN ESAVHTFWQN ENQVNIDVTP
ILNSLRNANM PIFALYGKQD GLYSDEQVSG LKYLIGNSNV KYLDRCSHTV FIDQQSLFLS
ALSTWLKKAK