| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1858 |
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| Symbol | |
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| ID | 8225429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2294546 |
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| End bp | 2297626 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644929708 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086260 |
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| Protein GI | 255035639 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAT TTACCCTAGC CAGAGGTCAG CTTGTTAAGT CGTTGCTGAC ATTATTATTA
AGTGTTTTAA CTATCCTCAC AGTATTGGCT CAGAATGTAA CCGTCACGGG AACAGTCACT
TCCGGAGGCG ACAATGCCGG TTTGCCGGGC GTTTCGATCA CCGTGAAAGG CACCAATTCA
GGCACAGTAA CAGATTTAAA CGGAAAGTAC AGCGTGCAGG TAAATGCTGA AAATGCCTCG
CTCGTATTTT CATTTATCGG TTATGAAGCG GTGGAAGAAG TTGTTGGCGG TCGCAGCGTG
ATCGACGTGG TGATGAAAGA AGATTTGAAG CAGCTCGGCG AAGTAGTCGT AGTCGGTTAT
GGAACGCAGA AAAAAGTGAA CCTTACCGGC GCCGTGGCGA CCGTGAGCGG CGACGAGATG
ATCAAACGAC CCGTGACCAA TTCCACCGCG ATGTTGCAGG GAACCATGCC CGGTGTGCAG
GTCACGCAGG GCAGGGGAGA GCCTGGTAAT GAAGGCATTT CGGTGCGGAT CCGCGGCACG
GGCACATTCA GCGGCGCGGG TTCTGATCCG CTTGTGCTGA TCGACGGGGT GCAGGGCAAT
ATGTCCGACC TGAATCCGAA TAACATTGAA AGCGTGTCGG TACTGAAAGA TGCGGCTTCG
GCTTCCATTT ACGGTGCGCG CGCGGCAAAC GGGGTGATTT TGGTTACGAC CAAAAAAGGC
AGTGAAGGTA AACTCAGTGT TCGTTACGAC GGCAATTTCG CCATTGCGAA ACCGACGAAA
CTGTTTGACC TGATCACCAA TTCGGCTGAA TACATGGAGC TTTATAATGA AGCGCGCGTG
AATTCGGGCC TCACTTCGGG GCTGTATTCC CAGCAGCAGA TCGACGAGTA CCGCAATGCC
ACCGACCGCA ATTTGTACCC GAACACCGAC TGGCTCAGCC TGATTTTCCG CACCGCGCCC
ACGCACCAGC ATAACCTTAC TTTCGACGGC GGCCGCGGCG GAACGCACTT CAATGCCTCG
ATCGGCTACG TGGATCAGAA GGGGATTATG AAAGGATTTG ATTTCAAGCG ATACAATGCG
CGGCTCAACA TTGCTTCGCA GATCAACAAA AAGATCAAAT TCGGGGCGAA CATTGCTTTG
AAATCCGGGA ATACGGAATC GCCGGTTTTT GGCTCGGAAG ATATGTTTTT GTCGGCGATG
TCGCAGGCGC CCACCTACGG GCCCAAGCTT TCCGACGGCA GCGGGAAGTT TACTTACAAG
GCGTATGATT TGGAATACAA TAATAAAAAC CCAATCGCGC TGCTGGAAGG GCACATTAAC
CGCGACAAGC TGGACTATTC GGCCAACACG CAGGGTTGGT TCGAGGTCAA TCTGGCCAAA
GGTCTGACCT GGTATGCCAA AGGCGCGGTG AATGCGGATT TTTATAAAAC CAAATCCTTC
AAACCGCCAT TGCAACTGTA CAATTACCGC ACAAATGCAT TCATGGCGAC GCTCGATCTG
GGCGGCGGAC TGGAAGTGAA GGACGAGCAG AATGTCTACA CCAATTTGTT TACGTACCTC
GACTACGAGC GCACATTCGG GCAAAATCAT GCATTCAAAT TGCAGGCAGG TTACAGTACC
GAAAAGAGCA CTTTCCAATA CCTTGAAGCA ATCCGCAGGA ATTTTCCGAC TGACATTTTG
CGCGAAATCG ACGCCGGAAG TCCGTCCATT CAATATGCCA ATGGTTCGCA GAATCAATGG
GCGATCAATT CATTTTTCGG GCGTTTGAAC TACAATTTCA AAGAGCGTTA CCTGCTGGAA
GCGAACATGC GCTACGACGG GACTTCACGG TTGGCGTCGG CGTCTCGCTG GGGTATTTTC
CCTTCTTTCT CGGCAGGCTG GCGTTTGACG GAAGAAGATT TTATCAAAGA CCTGAACCTC
AACTGGCTGA ACAGCGCCAA GTTCCGCGGC TCGTGGGGAC AATTGGGAAA TCAGAACATC
GGGAATTATC CATACCAGGC TATTCTCAGC TTTACCGGAA ACTATTCATT TGACGATTCC
AATTTATCCT CCGGTGTCGC GCAGACGAAT CTGTCCAACG CCAACATCAA ATGGGAAACC
ACCACAATCG CCGATTTCGG TCTGGACCTC ACCATTTTCC GCGGCCTGAA CCTGACCGCC
GACTGGTACC GTAAAACGAC GACGGACATT CTCAGGAGCT CCCAGGTGAC AGGCGTAGTA
GGCCTCGGCG CGCCGACGAT CAACAATGGT ACCATGCAGA ATACGGGCGT GGAATTGGGG
CTTTCTTATA GTAACCAGGT GAAAAGCGGC TTGTTTTCAG GGCTGAGCTA CACCGTGGGT
GGCAATTTGG AGCACTACAA AAACAAGCTG GTGAAATTTG GTCAGCGCGA GATTGACGGC
TACCGGATCC GCGAGGAAGG CCGGGAGTAC AACACCTACT ATATGCTGGA AATGATCGGT
ATTTTCCAGA CTGCCGACGA AGTGGCCACT GCGCCGAAAC AATACAATGA CGCCACCGTG
CCCGGCGATA TCCGCTACCG CGACGTGAAT GGCGACGGCC GCATTAACGA CGACGACCGC
GTGGCGATGA CGGGCAATTA TCCGGGAATG AACTATGCAT TCAATGGCAA TGTGAACTGG
AAAGGATTTG ATTTATCGGT TCTGTTTCAG GGGGTTAACA ATGTTAAATA TTTTGTCGAT
AACTGGGGAA CGGTGCCATT TGTACAAGGC TCGCCGCCGA CAACCGACTG GCGGAACCGC
TGGACACCCG AGAATCCGTC GGCTACGATG CCGCGCATTT ACTGGGGCTG GGGCGCGCCG
GACCGCATTC GCAGATCGTC CTCGTACTTC TTGCAGGATG CTTCCTACCT GCGTTTGAAA
AACCTCACAT TCGGTTACAC ACTGCCGCAA GCGGTGGTGA ACAAGCTCGG TATCGATAAC
CTGCGCGTGT TCTTCTCAGG CGACAACCTG ATCACAGCCA CGAAATACCC CGGCCTCGAC
CCCGAGCGCG GCGGCAGCGG CAGCTTTGTG CAATACCCTC AAAACAAGAT TTTCTCATTC
GGCTTAAATC TCAGATTATA A
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| Protein sequence | MEKFTLARGQ LVKSLLTLLL SVLTILTVLA QNVTVTGTVT SGGDNAGLPG VSITVKGTNS
GTVTDLNGKY SVQVNAENAS LVFSFIGYEA VEEVVGGRSV IDVVMKEDLK QLGEVVVVGY
GTQKKVNLTG AVATVSGDEM IKRPVTNSTA MLQGTMPGVQ VTQGRGEPGN EGISVRIRGT
GTFSGAGSDP LVLIDGVQGN MSDLNPNNIE SVSVLKDAAS ASIYGARAAN GVILVTTKKG
SEGKLSVRYD GNFAIAKPTK LFDLITNSAE YMELYNEARV NSGLTSGLYS QQQIDEYRNA
TDRNLYPNTD WLSLIFRTAP THQHNLTFDG GRGGTHFNAS IGYVDQKGIM KGFDFKRYNA
RLNIASQINK KIKFGANIAL KSGNTESPVF GSEDMFLSAM SQAPTYGPKL SDGSGKFTYK
AYDLEYNNKN PIALLEGHIN RDKLDYSANT QGWFEVNLAK GLTWYAKGAV NADFYKTKSF
KPPLQLYNYR TNAFMATLDL GGGLEVKDEQ NVYTNLFTYL DYERTFGQNH AFKLQAGYST
EKSTFQYLEA IRRNFPTDIL REIDAGSPSI QYANGSQNQW AINSFFGRLN YNFKERYLLE
ANMRYDGTSR LASASRWGIF PSFSAGWRLT EEDFIKDLNL NWLNSAKFRG SWGQLGNQNI
GNYPYQAILS FTGNYSFDDS NLSSGVAQTN LSNANIKWET TTIADFGLDL TIFRGLNLTA
DWYRKTTTDI LRSSQVTGVV GLGAPTINNG TMQNTGVELG LSYSNQVKSG LFSGLSYTVG
GNLEHYKNKL VKFGQREIDG YRIREEGREY NTYYMLEMIG IFQTADEVAT APKQYNDATV
PGDIRYRDVN GDGRINDDDR VAMTGNYPGM NYAFNGNVNW KGFDLSVLFQ GVNNVKYFVD
NWGTVPFVQG SPPTTDWRNR WTPENPSATM PRIYWGWGAP DRIRRSSSYF LQDASYLRLK
NLTFGYTLPQ AVVNKLGIDN LRVFFSGDNL ITATKYPGLD PERGGSGSFV QYPQNKIFSF
GLNLRL
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