| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1857 |
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| Symbol | |
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| ID | 8225428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2293029 |
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| End bp | 2294546 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644929707 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003086259 |
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| Protein GI | 255035638 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.363797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC AGAAATATAA ACTGTTTATG CTGCTGGCGC TGGCGTTCAG TTCATGTGAC
AATTCCCTGG ATCTCAATCC ACTCGACCAG ATTTCGACTT CGACCTTCTG GAAAACGAAA
AGTGATTTTG ACAAAGCATT AACCGCCAAT TATGCTTCCA TGCAGGCCGA TCCCTGGGCG
GTGGAGCTGC CGGTCTGGAA CTGTCTCACC GACGATGGTT TCGCGCAGCA CAATTCCGGC
GCGGCGAAGG AAATCACTTC GGGCAGCATC AGTCCTTCCA CAGGTGGTTA TGTGTCGGGT
GTTTACAGTG AAAGTTACAA GGCAATTGCG CGGGTCAATA TTTTTCTTGC CCAGCTTAAA
GCCTATGCAA ATCCTGACGT AACGGAAACT GACAGGAAGC TTTACGAGGC AGAAACGCGG
TTTTTGCGCG CATTTTATTA TTTCCAATTG TATCATTTGT ACGGAGATGT GCCGCTGGTT
TTGGAGCCGC TTACTCTGGA AACCCAAAAC CAGCCGAAAG TCCCAGCCGC TGAAATCCTG
GCGCAGATCA ATGCCGACCT GGACTTTGCC ATTGCCAACC TGAATGCAAA TGCTTATCCG
CAAAATGGCG GGCACGCGGC GGCTTCTTCG GCCCAGGCTT TGAAAGCGCG GGTGCTGATG
TACGCGGCTT ATGGTGAAAA CGGCACACCC GACGCAGCGA TCCTGGCGCA GGTAAAAGCA
TTGGCTACGG AGATTATGCT GAAGTACAGC CTGAGCCCCA ATTTTGAAGA TGTGTTCCGC
GATGCGGGCC AGAAGAACAA TCCCGAAATC ATCTTTTCGA CTAATTTCCT GGCCCCTAAC
AACACGCGGC CCTGGGATAT GTACTACGGC GACTGGCTGG TAGCGAGTCC GTTACAGAAT
TTTGTAGATG CTTTTGAATG CACCGACGGC CTGCCTTACG GCGTTTCTCC GCTGACAGAC
AAAAAAGAGC CCTTCAAAAA CCGCGACCCA CGCCTGGCCA AAACCGTTTT CGTCGACCAC
CCCGATTTTG GTGGCGGCAG GGTACATATC CCGTCCAACA GCCGGCCGTC GGGTTATGGT
GTTTTGAAAT TCCTGGAACC TGGCAACATT CCATTCGGGT ACTCCACATT GAGTCAGCAA
AATGCAGTAG TGTTGCGCCT GGCGGATGTT CTATTGATGT ATGCCGAAGC ACAAAATGAG
CTCGCCGGTC CGGATGCGAC GGTTTATAGA GCGATCAACG ACGTGCGTCT GCGCTCCAAA
ATGCCGGCAT TACCAGCAGG TTTAACCAAA GCCCAAATGC GCGAAAAAAT CCGCCACGAA
CGCCGCATCG AGCTGGCATT CGAAGGCCTG CGCTATTATG ATCTGAAAAG ATGGCACATT
GCCGGAGAGG TCCTGAACAG TGTAAAAGAC AGTTTCGTGC CTTATAAATT TGAAGATAAA
TTTTACAAAT GGCCCATCCC GCAGCCGGAA ATTGATAAAA GCGGCGGGGT GTTGAAGCAG
AATGAGGATT ATTTGTAA
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| Protein sequence | MKSQKYKLFM LLALAFSSCD NSLDLNPLDQ ISTSTFWKTK SDFDKALTAN YASMQADPWA
VELPVWNCLT DDGFAQHNSG AAKEITSGSI SPSTGGYVSG VYSESYKAIA RVNIFLAQLK
AYANPDVTET DRKLYEAETR FLRAFYYFQL YHLYGDVPLV LEPLTLETQN QPKVPAAEIL
AQINADLDFA IANLNANAYP QNGGHAAASS AQALKARVLM YAAYGENGTP DAAILAQVKA
LATEIMLKYS LSPNFEDVFR DAGQKNNPEI IFSTNFLAPN NTRPWDMYYG DWLVASPLQN
FVDAFECTDG LPYGVSPLTD KKEPFKNRDP RLAKTVFVDH PDFGGGRVHI PSNSRPSGYG
VLKFLEPGNI PFGYSTLSQQ NAVVLRLADV LLMYAEAQNE LAGPDATVYR AINDVRLRSK
MPALPAGLTK AQMREKIRHE RRIELAFEGL RYYDLKRWHI AGEVLNSVKD SFVPYKFEDK
FYKWPIPQPE IDKSGGVLKQ NEDYL
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