Gene Dfer_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1854 
Symbol 
ID8225425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2287285 
End bp2287659 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content48% 
IMG OID644929704 
Product(acyl-carrier protein) phosphodiesterase 
Protein accessionYP_003086256 
Protein GI255035635 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0531258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACG AACTGATCAA AGTCCTTGAA AAAGCCGCAC ATGAAAAGAA CCGGTTAGAA 
GAAATGAATG CGCTGGCATT CAGTAATGAG CTCATACGCG TGCTCAAAGC CGCAGATGTC
ATTGCGATAG GCGCACCAAT GTACAATTGG TGTATTACCA GCTCTTTAAA GGCGTATATC
GACCAGGTAC TGCGAATGAA TGAAACCTGG GGTTTAAACC GGGAAAACAG GCATGATCCA
TATATAGGCC TTCTGAAAGA CAAGACCGTT TACCTGCTGT TCTCAAGGGG TGCCGATGGC
TACGATCCGG GAGGATACAA TGAGCATATC AATTTTGCCG GTTCGGCCGC CCAGCCGATC
AGCGTCATGC TGTAA
 
Protein sequence
MRNELIKVLE KAAHEKNRLE EMNALAFSNE LIRVLKAADV IAIGAPMYNW CITSSLKAYI 
DQVLRMNETW GLNRENRHDP YIGLLKDKTV YLLFSRGADG YDPGGYNEHI NFAGSAAQPI
SVML