| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1850 |
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| Symbol | |
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| ID | 8225421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2279926 |
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| End bp | 2282985 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929700 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086252 |
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| Protein GI | 255035631 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.5615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA AAATTCTACT TTTTTGCCTG TTCTTTTTTT GCTGGACGTT GGCCGCCCAG
GCGCAAACGC GCCAGCTGAC GGGCAAGGTC ACCGACGAAG CGGCCAAAGG CCTTCCCGGT
GTCAGCATTG TCGTAAAAGG AAAACAGCAA GGCACAGTGA CCGATGTAGA CGGGCAATAC
AGGCTGCCCA TTTCGGAAGC GGAACCCGTA ACGCTCATCT TTTCGTTCGT CGGTTACGAA
AGTCAGGAAA TCGAAGCGGG AACCCGCTCG GCCATTGACA TTACATTGAA GCCGAATGAT
AATGCATTAT CGGAGGTGGT TGTGGTCGGC TACGGTACCC AAAAGAAGAG CGACCTCACC
GGCGCTATTT CGACCATCGG GTCGCGGGAA GTGGCCGGGC GGCAGACCAT CCAGATCTCG
GAAGCCTTGC AGGGAAGCAT TGCGGGCGTT TCCGTCACAC GCAGCAGCGG CGCGCCGGGC
GCTGGTGCCA ACATTCTCAT CCGCGGGATC ACCACGATCG GCACCAACAA TCCGCTCGTG
ATCGTCGACG GTGTGCCGGT CAGCAGCATT GACAACGTCA ATCCCGGCGA TGTAGAAAAT
ATAACGGTTC TGAAAGATGC TGCGTCAGCG GCCATTTACG GGTCGAGAGG GGCCGCGGGG
GTAATTCTGG TCACGACCAA ACGTGCCAAA TCAGGACAAA GCAGCCTGGA ATACACCTAC
GAATACGGCG TCCAGCGCGC CACGGCCATG CCCGAATACG TAGGCGTGCA GGATTATATG
CGGTATTTTA ATGAGCAAAC GACCAACGAC GGCGCGAGTG CGGGCCCGTT TGCACCAGGT
TTGATCGACA ACTACCTCGA TAGCAACCGC GTCAATCCCG ACCTTTTTCC CAACACCAAC
TGGCAAAAAT CACTGCTGAC CCGCCGCAAT GCGCCGCGCC AGCGCCACGA TTTGGTTTTT
ACCATGGGTA CCGGAAAAAT CAAAACCAAA GCTTCGCTCG GCTATACCAA TTCGGGTGCG
TTTTACGACA ACCGTTCGTA CAACCGCTAC CTGTTCCGGA TCAATAACGA TTTGCAGGTC
AACAATAAAA TGTCATTGAA CCTGGATGTT TTTTACAAAA GAACGACCAA CAACGGCAAT
GCCAACGAGC TGCCCAACAA CACATTCAAC CCCATTTACG AATCGCGCGT GATGCCGCCG
ATTTACGACG ATGTGTATTC CGACGGTCGG CTGGCATTCG GGAAAGACGG CCGGAACCCG
CTTGCGCAGC TGCGTGACGG CGGTTTTACC AAAACCCTCA ACAACCAGAT CGGCGGGCGC
ATTACGCTCA ACTATAAACC CGTAGCCGGA CTGACGCTGA CAGCCTTGAT CGCCCCGGTT
TTTGACCTCG ACAAAAACAA ATACTTTTCC AGACAGATCC GCTACACGAA TCCGGACGGA
AGCAACAGCA CGGTGGTGAA CCAGGCGCGG ACGGTCCTCA CCGAAGGCCG CCAGGAAAGC
ATTGCCATGA ATGGACAGGT GCTTGCCAAT TATGTGAAGG ATTTCAAAGG CGGCCACAAC
ATCGACGCAT TGGTAGGGTA TGAAGAAAAC TACCGCTCAT TCGAAACACT TTCCGCCTCG
CGCAGCGGCT TTGCACTCAC CGATTTTCCT TACCTGAATT CCGGTTCCAC CGAGCTGCGC
GACAATGCGG GCAGCGCCAA TGAATCGGGG CTGCATTCGG TATTCGGGCG GTTGCAATAC
AATTACAAAA GCAAATATTT TATCCAGGGA AACCTGCGCT CGGATTTGTC GTCGCGTTTT
GCGCCGGCCT ATCGCGAGGC GATCTATCCT TCATTGTCGG CAGGTTGGAC GATTTCGGAA
GAGTCTTTTA TCAAAAATAT TCCCTGGCTG TCATTCCTGA AAGTACGCGG CTCATGGGGT
AAAGCGGGTA ACGAGCGCCT GCTCGACAAA GATGGAAATC CGGCTTATTA CCCCTACATG
GCGACCATTG ATTTTTCCAA CGCATTGTTT TATCAAAATG GCAGCGTAGT GCCGCTCACA
GGCGGCGGCC AGCAGGTGTA TGCCGTGGAA AATATATCCT GGGAAACGAG CCGGACCACG
GATTTCGGTA TCGACGCGGC ATTTCTGAAT GATCGCCTGA GCGTGGCCGC AGATTATTAC
ATGAAAAAAA CCACCGACAT TCTGCTCCCG CTCGACATTC CGCTGTACCT GGGGTACGAT
AAACCCAATC AGAATGCGGG TGTGCTGAAT GTAAGAGGCT GGGAGCTGGA ACTGGCCTGG
CGCGAGAAAA TCAATGCATT CAGCTACTCG GTTTCCGCCA ACCTATCTGA TGCCAAATCC
ACGGTAGGCG ATTTGAAAGG CACCGAATTC CGCGGCGACC AGATCATCCG GAATGGCAGC
GAGTATAACG AATGGTTTGG CTACCTGTCC AACGGCCTGT TCCAGACGCA GGACGAAATC
ACCGGCGCGC CCGTGCTCAA CGTAACCACC ATGCCCGGCG ACGTGCGTTA TGTGGATGTC
AATAAGGACG GGAAAATCAC CACGGACGAC AAAGTGCTGC TCGGCGGCGC ATTGCCCCGC
TATCTCTACG GCGGCAACCT GCGCGCCGAT TATGCCGGTG TCGATTTCGG TATTAGCTTC
CAGGGCGTTG CCAAAAAGTT GTCGCGCCTG AACACCGACG CCGTGCAGCC ATTTGCAGAA
GCATTCGGGA ATATGCCTGC GGAAATGGTA GGCAACTTCT GGAGCCTCAA CAATACCGCT
CAGCAAAACC TGGCCGCAAC CTATCCGCGA CTTTCCCGTA CGTCCAATGC CGCCAATTAC
TCCCTTTCCG ATTACTGGCT GATTAACGGC GGTTATTTCC GGTTGAAAAA CGTCACGCTG
GGCTACACGC TGGGCCAGTC GGCAGTGAAG AAAGCGGGCA TTCAGTCGCT GCGGTTTTAT
CTGTCCGCCA ACGATGTTTT CTCGCTCAGT AAATTCCCGA AATACCTTGA TCCCGAGTCG
GCCAGCTATG CTTATCCCAT TGTAGCCACC TTCATGGCGG GCGCTACGAT CCGGTTTTAG
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| Protein sequence | MGQKILLFCL FFFCWTLAAQ AQTRQLTGKV TDEAAKGLPG VSIVVKGKQQ GTVTDVDGQY
RLPISEAEPV TLIFSFVGYE SQEIEAGTRS AIDITLKPND NALSEVVVVG YGTQKKSDLT
GAISTIGSRE VAGRQTIQIS EALQGSIAGV SVTRSSGAPG AGANILIRGI TTIGTNNPLV
IVDGVPVSSI DNVNPGDVEN ITVLKDAASA AIYGSRGAAG VILVTTKRAK SGQSSLEYTY
EYGVQRATAM PEYVGVQDYM RYFNEQTTND GASAGPFAPG LIDNYLDSNR VNPDLFPNTN
WQKSLLTRRN APRQRHDLVF TMGTGKIKTK ASLGYTNSGA FYDNRSYNRY LFRINNDLQV
NNKMSLNLDV FYKRTTNNGN ANELPNNTFN PIYESRVMPP IYDDVYSDGR LAFGKDGRNP
LAQLRDGGFT KTLNNQIGGR ITLNYKPVAG LTLTALIAPV FDLDKNKYFS RQIRYTNPDG
SNSTVVNQAR TVLTEGRQES IAMNGQVLAN YVKDFKGGHN IDALVGYEEN YRSFETLSAS
RSGFALTDFP YLNSGSTELR DNAGSANESG LHSVFGRLQY NYKSKYFIQG NLRSDLSSRF
APAYREAIYP SLSAGWTISE ESFIKNIPWL SFLKVRGSWG KAGNERLLDK DGNPAYYPYM
ATIDFSNALF YQNGSVVPLT GGGQQVYAVE NISWETSRTT DFGIDAAFLN DRLSVAADYY
MKKTTDILLP LDIPLYLGYD KPNQNAGVLN VRGWELELAW REKINAFSYS VSANLSDAKS
TVGDLKGTEF RGDQIIRNGS EYNEWFGYLS NGLFQTQDEI TGAPVLNVTT MPGDVRYVDV
NKDGKITTDD KVLLGGALPR YLYGGNLRAD YAGVDFGISF QGVAKKLSRL NTDAVQPFAE
AFGNMPAEMV GNFWSLNNTA QQNLAATYPR LSRTSNAANY SLSDYWLING GYFRLKNVTL
GYTLGQSAVK KAGIQSLRFY LSANDVFSLS KFPKYLDPES ASYAYPIVAT FMAGATIRF
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