| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1834 |
|---|
| Symbol | |
|---|
| ID | 8225405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2256455 |
|---|
| End bp | 2257303 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644929684 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003086236 |
|---|
| Protein GI | 255035615 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.73118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCA AACGCAACGC CATACCGCTA CACGTTCTAC CCCAGGGGCA GTTTATGGCT
TCGGACCAGG TGGTTGCGTT TGGCGAACAC CGGCCGAGCC ACCGCATTAA TTTTTATGCG
CTGGTGTGGT TTAGTGAAGA TATGGGCGTC CAGTATATCG ATTTTGAACC TTATCCCATT
CAAAAGAACC TGGTATACCT GATCTCCAAA AACCAGGTGC ATTCCATTCC ATCGGCCCAG
CTCCCAAAAG CGAGGGTGAT CGTCTTTTCC GAAGAATTCT TTCACCGCAT TGAAGAAATG
CAGCTCCGGC AGCTATTCCT GCCATTTGAA AACAAGGGAA TACCGATTCC GCCGGAAATG
ACCGCGCCGC TGGAAGCTTT ATTTTCGCTC ATATTGCTGG AATATGCAGG CATTGCGGAA
ATTACGGTGC TGCTGGAATA CACAACCGTT TTTCTGCATC ACCTACACCG TTTCGGCACG
CACAAACTCC GCGCGGCAGT GGGCGACGAC CTGCGCATTG TCAGGTTGTT TCAATTGATG
GAAGAAAATT TCAAAGAAAA CAGATCCGCG TCCTATTATG CCGGGCAAAT CGGGCTGACA
CCGAAAAGAG TAAATGAAAT TTTGCGTGCG AAAGCGGGCA TTACCATGAG TCAGCTGCTC
AGCCAGCTTG TGCTGATAGA AAGTAAAAGA GAACTGTTTT ACGGGGAATT TTCAATTAAA
GAAATTGCCT ATAACCTGGG TTTTGCCGAC CAGTCCTACT TCGCCCGTTT TTTCAAAAAG
CAAACCGGTT TGACGCCGGA GAAGTTCAAA TACAATGTTC ATCAGCAAGC TCCCTACGCC
CGTTCGTAA
|
|---|
| Protein sequence | MDSKRNAIPL HVLPQGQFMA SDQVVAFGEH RPSHRINFYA LVWFSEDMGV QYIDFEPYPI
QKNLVYLISK NQVHSIPSAQ LPKARVIVFS EEFFHRIEEM QLRQLFLPFE NKGIPIPPEM
TAPLEALFSL ILLEYAGIAE ITVLLEYTTV FLHHLHRFGT HKLRAAVGDD LRIVRLFQLM
EENFKENRSA SYYAGQIGLT PKRVNEILRA KAGITMSQLL SQLVLIESKR ELFYGEFSIK
EIAYNLGFAD QSYFARFFKK QTGLTPEKFK YNVHQQAPYA RS
|
|---|
| |