Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1806 |
Symbol | |
ID | 8225377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2223217 |
End bp | 2225589 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644929658 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003086210 |
Protein GI | 255035589 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA ACTACATCAA AATCGCACTC AGAAATATCT CGAAAAGCAA GGGATATTCC GCCATCAATA TCGGAGGACT TGCCATAGGA ATGGCCGTTG CCGTCCTGAT CGGCCTTTGG CTCTATGATG AATTGTCGTT TGACAAATAC CATAAGAACT ATGAGCGGAT TGGCCTTGTG ATGCAGCATG TAAAATTTGA TGTCGAAAAA TCGACCTACA AGGATGCTCC CATTCCCTTG GGAGAAGAAC TCCGCAGCAC GTACCCCGAT TTCGAGTCGG TGGCGGTGAC ACGGACCCAG GGGCTGATCC TGGCTTCGGG TGACGATAAA TTCTTTAAGA CAGGCATTTC TGTGGAGCCG GATTTTTTGG ATATGATGTC CGTTAATTTG CTGGCTGGGA ATCGCGGGGG CTTGCAGGAA GTGAACGCTG TGATGCTCTC TGAAAGTCTG GCGAAGGCTT TCTTTGGGAC CGAAAACCCT TTGAACAAGG TCATCAAAAT CGACAATAAG CTGGATGTGA AAGTGACGGG CGTTTACGAG GATTTTCCTG AAAACAGCTC ATTTAAGGAA GTGACCTTTA TTATCCCATG GAAACTGGCG ATTGCCAAAG ACGAATACGT AAGAAGCTCT TTGCAGGAAT GGGATGAAAA TTCCTTTTAT ATATACGGCC TTCTGAAAAA GGGAGCAGAT TTTGATGAGG TTTCAGCTAA AATTAAGGAC GTGCGGATGA AACGCAGTGA TCCCCCCGGC TACAAACCTG AGTTTTTCAT CCAACCGATG AGCAAGTGGC ATTTGTATGC CGATTTTAAA GACGGAGTCA ACACCGGCGG ACTGATCCGG TTTGTCTGGC TTTTTGGCAT CATCGGCATT TTTGTATTGC TGCTGGCATG TATCAATTTC ATGAACCTAA GCACCGCACG TTCGCAGCAG CGTGCGCGGG AAGTCGGGAT CAGGAAAGCC ATCGGCTCGT TTCGCGGTCA GCTGATCGGG CAGTTTTTCA GCGAATCCTT TCTCGTCGTT TTCATTGCTT TTGTAATCGC CATCGGACTG GCCGCCCTGG CACTCCCATT TTTCAACGAA GTTGCGGAAA AAGAAATGTC CATTTTGTGG CTGAACCCCT GGTTCTGGGC TGCGGGGATA GCGTTCAGCA TTCTGACAGG AATCATAGCC GGCAGCTATC CGGCGCTGTA TTTGTCTTCG TTTCAGCCAC TTAAAGTACT CAAAGGCGCG ATGTATGCGG GACGGTTTGC GGCGACTCCC CGCAAAGTAC TGGTAGTTGT ACAGTTTACC GTATCCGTCA CATTAATTAT CGGGACAATT ATCGTTTTCC GGCAGATTCG CTTCGCCAAA GACCGTCCGA TCGGATACAG CCGCAATGGC TTGATCGAGA TCCAAATGAC CACCCCGGAG CTGTACGGCC ACTACGACGC GTTACGCACC GACCTGAAAA ACACAGGCGC AGTGAAGGAA ATGTCCCAAT CATCCAGCCT CGTAACCGCG AAGGACGCAG GCACCACCGA TTTCTCCTGG GAAGGGAAAA GCCCCGAAAG CCATCCCCTG TTCCAATCCA ACGCCGTGAC GCACGACTAT GGCAACACCA TCGGCTGGCA GATTAAAGCA GGCAGGGATT TTTCCAGAAC CTTTTCTACT GACACCGCTT CCATTATTTT GAACGAGGCG GCAGTTAAAA TCATGGGCGT TAAAGATCCG CTTAACGCCT TCGTCAGAGC GCGCGGCCGG TCTTACAAGG TGGTGGGGAT TGTGAAAGAT ATGATCAAGG AGAATCCCTT TTCGCCCGTA AGCCCTTCCT TTTTTATATG CAACTACAAA TACACCAACA CGATAAATAT CAGACTGGCA GCAGGCCGGA GCGTAAGTGA GGCGGTGGCG GAAGTCGAAA ATGTGTTCAA AAAATACAGT CCCGGCAGTC CATTCACTTA TCAATTTGCG GATGAGGAGT ACTCCAAGAA ATTCAGAACA GAAGAACGCG TCGGCAAGCT TTCGACATTC TTTGCCAGCC TCGCGATTTT GATCTCCTGT CTGGGATTGT TTGGACTAGC CTCATTCGTC GCCGAGCAGC GTACCAAGGA GCTTGGAATC CGAAAAGTAC TGGGCGCGTC GGTCGCCAGT TTATGGCAAA TGCTTTCCAG GGATTTTGTG CTTCTGGTGG TCATCTCTTG CGCCATTTCC ATACCGGTCA CCTGGCATTT TATGGGAAAA TGGCTGGCAA ACTACGAGTA CCGGACCGAA ATGTCCTGGT GGATTTTCGC CGTCACATCT ACCGGTGCTT TGATCATTAC GTTGTTAACG GTAAGTTTCC AGGCAATCAG GGCGGCGCTG TTAGATCCCG TGAAATCATT GAAATCGGAG TAG
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Protein sequence | MISNYIKIAL RNISKSKGYS AINIGGLAIG MAVAVLIGLW LYDELSFDKY HKNYERIGLV MQHVKFDVEK STYKDAPIPL GEELRSTYPD FESVAVTRTQ GLILASGDDK FFKTGISVEP DFLDMMSVNL LAGNRGGLQE VNAVMLSESL AKAFFGTENP LNKVIKIDNK LDVKVTGVYE DFPENSSFKE VTFIIPWKLA IAKDEYVRSS LQEWDENSFY IYGLLKKGAD FDEVSAKIKD VRMKRSDPPG YKPEFFIQPM SKWHLYADFK DGVNTGGLIR FVWLFGIIGI FVLLLACINF MNLSTARSQQ RAREVGIRKA IGSFRGQLIG QFFSESFLVV FIAFVIAIGL AALALPFFNE VAEKEMSILW LNPWFWAAGI AFSILTGIIA GSYPALYLSS FQPLKVLKGA MYAGRFAATP RKVLVVVQFT VSVTLIIGTI IVFRQIRFAK DRPIGYSRNG LIEIQMTTPE LYGHYDALRT DLKNTGAVKE MSQSSSLVTA KDAGTTDFSW EGKSPESHPL FQSNAVTHDY GNTIGWQIKA GRDFSRTFST DTASIILNEA AVKIMGVKDP LNAFVRARGR SYKVVGIVKD MIKENPFSPV SPSFFICNYK YTNTINIRLA AGRSVSEAVA EVENVFKKYS PGSPFTYQFA DEEYSKKFRT EERVGKLSTF FASLAILISC LGLFGLASFV AEQRTKELGI RKVLGASVAS LWQMLSRDFV LLVVISCAIS IPVTWHFMGK WLANYEYRTE MSWWIFAVTS TGALIITLLT VSFQAIRAAL LDPVKSLKSE
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