| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1779 |
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| Symbol | |
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| ID | 8225350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2189626 |
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| End bp | 2191083 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929632 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003086184 |
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| Protein GI | 255035563 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATT TAAAACATTC CCTGATATAC TTTCTGATGG CCGTCGGCGC GTTTTCGTGC
AGCCAGGACC AGCTTGACCA GTACCCCGAA ACCCGGCTGA CGGAAGGCAG CTTTTACACC
TCCGAAGCGC AGATTGTCCA GGCCGTCAAC GATGTATACC GCCAGCTCAA CCGCACCTAC
GCGGCCAGCG GGCTGGTAGA TCTGTACGGT GAATTGTATT CGGACAATAC CTACATCGAG
TTTTCCGGCG GCTCCACCAC CTTTGAAGAC GACATCAAGG CATTCCGCAT TCAGCCGAAC
AACGGCCTGA TCCAGACGGC CTGGAACAAC AGTTACAATT CGATCTACAT CTGCAATAAT
GCCATTGAGC AGCTGGAAAA AACGAAGGTG CAGTTCAGTA ACCCCGCGCT CAAAGACCGC
CTGAAAGCGG AGGCGACGTT CATCCGGTCG CTGATATTCT TTAATATGGT GAGGGTTTGG
GGAGACATTC CTTTGCCGCT GAAAGTGGTG AGCGCTGACG AGAGCTACAC TTACCTGCGC
GAGAAAAAGG AGGCGGTGTA CCAGCAGCTC ATCACCGACC TGAAAGCCAG CAAGCTCGCA
TTGCCCGAAA AATACACGGG CACCGATGTG GGCCGGGTTA CCAAATATGC CGCCGCCGCG
ATCCTGGCCA AAGTGTACCT GACGATCGGT GACAAGGCCA ATGCAGCCAA AGAATTGAAG
GAAATCATCG ATAGCAATGC CTATTCGCTG GATGCCAACC AGGATGGCAA GGTGAACAGC
GCCGACTATG CATTCAATTT TGCGCCGGGC ACCAAGAATT CGAAGGAGTC TGTCCTGGAA
CTGCAATTTC TGGCGGGACA AAACGCCGTG AACAGTAACT ACCAGCAGAC TTACACGCCT
TACCACTGGG CCTTCCACTT GCCGGGAAGT ACCGAAACTT TCCGCGGCAG CGGCCTCAAC
AGTCCGTCCC CGGACCTCAC CAATGAGTTT GAAACAGCGG ATACCGTACG CAAGAATATT
TCCGTATACC CCGGCTACGT GAACCTGGAA ACGGGCGCAT TCATTAAATA CCCGTTCACC
CAAAAATTCT ACGATCCAAA CTGGCGCTAT CCGGGCCAGA ACGTGGAGCT GGTAAGGTAT
GCCGACGTCC TGCTCTCCTA CTCCGAAGCC ACCGGCGACC CGTCGTATCT CAACCAGGTG
CGCGAGCGCG TAGGCCTGCC CGGCTATGGC AAAGCGGGCT ATCCGGCCAA ATACAATTCA
CTCGCGCTGG CGATCGAACA TGAGAGAAGG GCCGAATTGT GCTTTGAGTT TCACAGGTTC
TTCGACCTCG TGCGCACGGG CCGGGCTGTG GAGGTATTGA AATCAAAAGG ATTTAACATT
ACCGACAGCA AACTGCTGTT CCCGATCCCG CAGAGCGCCA TCGACGTGAA CCCGCAACTG
ACGCAAAACG CCTATTGA
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| Protein sequence | MKYLKHSLIY FLMAVGAFSC SQDQLDQYPE TRLTEGSFYT SEAQIVQAVN DVYRQLNRTY
AASGLVDLYG ELYSDNTYIE FSGGSTTFED DIKAFRIQPN NGLIQTAWNN SYNSIYICNN
AIEQLEKTKV QFSNPALKDR LKAEATFIRS LIFFNMVRVW GDIPLPLKVV SADESYTYLR
EKKEAVYQQL ITDLKASKLA LPEKYTGTDV GRVTKYAAAA ILAKVYLTIG DKANAAKELK
EIIDSNAYSL DANQDGKVNS ADYAFNFAPG TKNSKESVLE LQFLAGQNAV NSNYQQTYTP
YHWAFHLPGS TETFRGSGLN SPSPDLTNEF ETADTVRKNI SVYPGYVNLE TGAFIKYPFT
QKFYDPNWRY PGQNVELVRY ADVLLSYSEA TGDPSYLNQV RERVGLPGYG KAGYPAKYNS
LALAIEHERR AELCFEFHRF FDLVRTGRAV EVLKSKGFNI TDSKLLFPIP QSAIDVNPQL
TQNAY
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