| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1776 |
|---|
| Symbol | |
|---|
| ID | 8225347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2183107 |
|---|
| End bp | 2184669 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929630 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003086182 |
|---|
| Protein GI | 255035561 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.791288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT ATAAAACCAA ACAGTTCGCG ATCCTGGGCA CCTCGCTGGC GGTGCTTTTG
GCTGCTACCG GATGGCAATT TGCGCCCCAA ACCGAAAAAG CCGCAAAACC CAACATCGTG
ATCGTTAACC TCGACGACCT GGGCTACGGC GACGTGGGCG CATACGGCGC CACGGCATTG
AAAACGCCCA ATATGGACCG CATCGCAAAT GGAGGGATTC GGTTTACGAA CGGCTATGCC
ACTTCCTCCA CCTGCACGCC GAGCCGGTTT GCATTGGTGA CGGGCGTGTA TCCATGGCGC
AATAAAGAAG CTAAAATCCT GCCCGGCGAT GCCCCGCTGC TGATCGATAC CGCCCAGCAA
ACCATCCCGA AAGTGCTCAA AAAAGCAGGC TATGCGACCG CTATTGTCGG AAAATGGCAT
TTGGGGCTCG GAAACGGCGA TACCGACTGG AACAAGGAAG TGAAACCGGG ACCAAACCAG
CTCGGCTTCG ATTATTCCTA CATCCTCGCC GCTACCCAGG ACCGCGTGCC CACGGTTTAC
ATTGAAAATA CGCGCGTGGT AGGCCTCGAT CCGAACGATC CGATCCGGGT GAGTTACAAG
CAGAATTTCG AAGGCGAGCC GACGGGAAAA GACAATCCGG AGCTGCTGAA AATGAAATGG
CACCACGGTC ACGACCAGAG CATCGTGAAC GGCATTTCGC GCATCGGCTA CATGAAAGGC
GGCCAGAAAG CGAAGTGGAA CGATGAGGAA ATGGCCGATC TGTTTTTGAC CAAAGCACAG
CAGTTTATCA AAGACCATAA ATCCAAACCC TTTTTCCTGT ACTACGCCAT GCAGCAGCCG
CACGTGCCCC GCACGCCGCA CCCGCGTTTC AAGGGCGTTA CCGGCATGGG ACCAAGAGGC
GACGCTATCG CCGAAGCGGA CTGGTGCCTG GGCGAATTGC TGAATACGCT GGAAAAAGAA
GGCATCCTGG AAAATACCCT CATTATCTTC ACCAGCGACA ATGGCCCGGT GGTGAACGAC
GGCTACCACG ACGACGCGGT GGAAAAACTG GGCAAGCACA AACCCGCCGG ACCGCTACGT
GGCGGCAAAT ACAGCTTGTT TGAAGCCGGT GTGCGGGTTC CATTCATTAC CTATTGGAAA
GGCACGATCA AGCCTGCGGT ATCGGATGCG GTGGTTTGCC AGCTGGATCT GCTGAGCTCG
CTCGCGCACC TGACCGGACA GGAGGCGAAG GGCCTCGACA GCCGGAATTA CCTGGATGTA
TTTTTAGGTA AAACCCAAAA AGGCCGCAGC GAGCTGATCC TCGAAGCCAG CTCGCGCACG
GCATTGCGGC AGGGCGACTG GCTGATGATA CCGCCCTACA ATGGCCCGGC GATCAATAAA
ATGGTGAATA TCGAGCTTGG TAATGCGAAA GAATATCAGC TTTATAATCT AAAAACGGAC
ATTGGCCAGC AGCATAACCT GGCCAAATCG GAGCCGGAAA GGCTGAAAAA GCTCGTTACT
GCATTTGAGC AGCTGCAACA AGGCGGGGCA AAAAGGGAGA CGGAGACGAT CAAGCTCGAA
TAA
|
|---|
| Protein sequence | MIKYKTKQFA ILGTSLAVLL AATGWQFAPQ TEKAAKPNIV IVNLDDLGYG DVGAYGATAL
KTPNMDRIAN GGIRFTNGYA TSSTCTPSRF ALVTGVYPWR NKEAKILPGD APLLIDTAQQ
TIPKVLKKAG YATAIVGKWH LGLGNGDTDW NKEVKPGPNQ LGFDYSYILA ATQDRVPTVY
IENTRVVGLD PNDPIRVSYK QNFEGEPTGK DNPELLKMKW HHGHDQSIVN GISRIGYMKG
GQKAKWNDEE MADLFLTKAQ QFIKDHKSKP FFLYYAMQQP HVPRTPHPRF KGVTGMGPRG
DAIAEADWCL GELLNTLEKE GILENTLIIF TSDNGPVVND GYHDDAVEKL GKHKPAGPLR
GGKYSLFEAG VRVPFITYWK GTIKPAVSDA VVCQLDLLSS LAHLTGQEAK GLDSRNYLDV
FLGKTQKGRS ELILEASSRT ALRQGDWLMI PPYNGPAINK MVNIELGNAK EYQLYNLKTD
IGQQHNLAKS EPERLKKLVT AFEQLQQGGA KRETETIKLE
|
|---|
| |