| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1766 |
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| Symbol | |
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| ID | 8225337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2168049 |
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| End bp | 2171399 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929620 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086172 |
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| Protein GI | 255035551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0232965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0564534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTA ATTCTAAATC TACGGGTGAC GTGCGGATTT ATGAGACGAA ATCGCCCTGG
CCGATCCGGG CCGGCGCATT GCGGCTCTGG GCATTGGTCG CGCTCTTTCT TTTTATTCAC
GCCGGCGCCC GTGCCGGCTC GCCGATGATC ACGTTGTCGG TCAAAAATGC CCCGATCGAA
AAAGTCTTTA AAAGCATCAG AAAGCAATCC GGCTATCTTT TCCTGCACAC GGAGGAAGTT
CTGAAAAACG CGCGGCCGGT CAGTGTCCAT ATTGAACAAT CAAGCATTGA GAAGGTTCTT
GAAAAATGCT TCGAAAACCA GCCGCTGAGT TACCGAATCT CCAACAAAAC GGTGGTTGTC
CACCTGGCGG GCAACAAGTT GCCTGCGCCA GCGCCGGACA CGGAAAGTTC CGCCATTCCA
TTGCCCCCGG CCAGGGTCAC AGGGATTGTG GTCGATTCGG CGTCGCGCAT GCCAATGCCC
GGCGTAACAC TCCGCGTCAA GGGAAGTGCA GAGGGGGCCG TTACCGATCC CGATGGCCGT
TTTTCACTTG AAATCCAGGA AAAGGGCGTG ATTCTCATTG TGTCGTACGT CGGTTATAGC
ACGCAGGAAA TAAGGGCGTC CGGCGGTGAG GATCTTCGGA TCGTGCTGGG TACCGCCATT
TCGGCCCTTG ACCAGGTGGT GGTAGTCGGG TACGGCAGTG TGAAAAAGCG GGATGTGACG
GGCGCTGTTT CGGTAATCAA AGGCAGCGAC ATTGAATCCG CGCCTGTTGC CAGCGTGGAT
CAGGCCTTGC AGGGAAAAGC GGCCGGCGTG CAGGTGACCG CGGTGAATGG CGCTCCGGGA
GCAGCCACGA CAATCAGGAT TCGCGGCGGG AACTCCATAT CCGCGTCCAA CGAGCCGCTG
TACGTGATCG ACGGCTTCAT CGGCGAGTTC AGCCTCACTT CCATCAACCC GACGGACATT
GCCTCCATCG AAATCCTGAA AGACGCGTCG GCCACGGCGA TTTATGGCGC GCGCGGGGCC
AATGGCGTAA TCCTGATCAC CACCAAAAGA GGGAAAGCGG GCCGGTCCAA TATATCGGTC
AACGCCTACA CTGGGTTCCA GCAGCTGCCG CGGGAAATCG ATTTGCTCAA CGGGCCGCAG
CTGGCCGAAT TTGTCAATGA GCGGGCCGAG CTTTTCGGTG CGGCACCTAT TTTCGACGAC
CTGTCGAAGG TAACCACTAC CAACTGGCAA AAGGCCATCA CGCGCACCGC GCCCATGAGC
AGCGCCAATC TCGCTTTTGA AGGCGGGACC GAAAAACTGA CCTATTATTT ATCCGGCAAC
TATTTTAACC AGGATGGTAT CATTCTGAAC TCCGGTTTTC AGCGGTATCA AACGCGGCTG
AACCTGGATT TGAAAATAAC CAACTGGTTA TCTGTCGGGG CGAATATGAA CTTCAATCGC
TCCAACACGA ACAACAATAA GGTAAACCTG TACGACGTCC TGAAAAGCGC CCCAACCACC
TCGCCGGTCA CCGACGAAAA CGGAGATTAT GTGATCGTCA GCAACCTCAA TGGCGGCACA
TTTGAAAACC CGGTGGCTGT TGCCAAAATG ACGCTTGACA ACACCTATAA CAACAGCCTG
CTGGGCAACT GGTTCTTACT GGCCGATTTC AAAAACGGTT TGCAGCTCAA ATCGCAGCTG
GGGATCAACA ACGTCAATGC GAAATCCAAG CAGTACAGGC CCGGCGCGCT GCCGCTCAGG
AGTACCCAGC GGGTGGGCGG CTCTGCGTAT TTGTCCAACA CGCAGAGCCT GAACCTGCTC
AGCGAAAATA CAATCAGCTA CAATAAGCAA TGGGACAGCC ATCAGATCAA TGTACTGGGC
GGATTTACCT ACCAAAAGGA AAACCTGGAA TCGTTTACGG CAACCGGACA GGGTTTCGCC
AACGACCTGC TGGCTTACAA TAACCTTGCA ACCGGAAATC CGCTGCAGGC CAGTAACACT
TCCACAGCCA CGGAATGGAC GATCATCTCC TTCCTTGCCC GCCTGAATTA CTCCCTGAAA
GGCAAATACC TGTTCACGGT CACCGCCCGC AACGACGGAT CGTCGCGTTT GTCGGCCAAT
CACAAACATG CGTTTTTCCC TTCCGCGGCG TTTGCGTGGC AGTTGGGAGA GGAGGATTTT
GTCAAAAACC TGGGCTGGTT TGATCACCTG AAAGTACGTT TGACCTACGG CAAAACGGGC
AACCAGGCCA TCGGGGTTTA TTCTACACTC GCTTCTTTGA GCGTTTCCAA TGCCTGGTTC
AATGGCGTGC AGCAAACCGG TTACGCGCTG GGAACGCTGG CCAACAGCAA TCTGAAATGG
GAAACGACCG ACCAGTTAGA TGCCGGAATC GATGCCTCGT TATTAAAAGG CCGGCTGTCG
GTAAACCTGG ATTTTTATTA CAAAAAAACC TACAACCTCC TGCTATCCGC GCAAATCCCC
GGCACAACAG GCTATTCGAG CAGGTTACAG AATATCGGGA CCGTGCAAAA CAAAGGCATT
GAGCTCACTG TGGAAGGCAC GGTGCTCGAT CGTCCCGACT TCACGTGGGA TCTGGGCTTT
AACATCGCCG CCAACCGCAA CAAGGTGCTG GACCTGGGGC GTGGTTTGCA GCACCGCGAA
CTGACCGACG GCGCAAGACT GATTGTAGGC AAGCCCGCAC CGGTTTTCTA CGGTCTTGTG
TACGAAGGGA CTTACAAGAG TCAGGAAGAA ATAGACGCCC TACCCACGCC CATTCCCGGC
TTGAAGCCCG GTTTTCCCAA ATTCAGGGAC GTGAATGGCA ATGGTAAGTA CGACGGCGTG
GCGGATTACG ACATCATCGG AAGTCCCGAG CCGCTTTTCT TTGGCGGTTT CAATACGGCA
TTGCGGTATA AGAGGCTCAG TATGAACGCC TTTTTTCAAT ACACTTATGG GAATGACGTC
GTCAACAGCT TTGGCCCACG GCTTTTCATG GGCGAATATG CGTCGAATGT TGCGGCTCAG
CAGACGGGTC GCTGGACGCT TGAAAATAAC CAGTCGGATC TGCCGCGTGT AGGCTCGCAT
TCTGTTTACA GTGTCAATAC GCAAGCCTAT TCTTTCGCGG TCCAGGATGG TTCTTTCCTG
CGGTTGAAAA CATTGCAATT GAACTATAAC ATCAGCTCAG AGCGGATTAA GTGGCTGAAA
AATGCCAGCA TTTACGTTAC CGGCTCCAAC CTGTTCCTGC TCGATCGCTA CAAATGGGGC
TATGATCCGG AGGTCAATTC AAATGGTACC AATGCGGTAC TGAGAGGTTT CGACGGATAC
AGCTACCCGC AAAACCGCTC CTTCATATTT GGCGTCAACC TGAAACTTTA A
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| Protein sequence | MDFNSKSTGD VRIYETKSPW PIRAGALRLW ALVALFLFIH AGARAGSPMI TLSVKNAPIE
KVFKSIRKQS GYLFLHTEEV LKNARPVSVH IEQSSIEKVL EKCFENQPLS YRISNKTVVV
HLAGNKLPAP APDTESSAIP LPPARVTGIV VDSASRMPMP GVTLRVKGSA EGAVTDPDGR
FSLEIQEKGV ILIVSYVGYS TQEIRASGGE DLRIVLGTAI SALDQVVVVG YGSVKKRDVT
GAVSVIKGSD IESAPVASVD QALQGKAAGV QVTAVNGAPG AATTIRIRGG NSISASNEPL
YVIDGFIGEF SLTSINPTDI ASIEILKDAS ATAIYGARGA NGVILITTKR GKAGRSNISV
NAYTGFQQLP REIDLLNGPQ LAEFVNERAE LFGAAPIFDD LSKVTTTNWQ KAITRTAPMS
SANLAFEGGT EKLTYYLSGN YFNQDGIILN SGFQRYQTRL NLDLKITNWL SVGANMNFNR
SNTNNNKVNL YDVLKSAPTT SPVTDENGDY VIVSNLNGGT FENPVAVAKM TLDNTYNNSL
LGNWFLLADF KNGLQLKSQL GINNVNAKSK QYRPGALPLR STQRVGGSAY LSNTQSLNLL
SENTISYNKQ WDSHQINVLG GFTYQKENLE SFTATGQGFA NDLLAYNNLA TGNPLQASNT
STATEWTIIS FLARLNYSLK GKYLFTVTAR NDGSSRLSAN HKHAFFPSAA FAWQLGEEDF
VKNLGWFDHL KVRLTYGKTG NQAIGVYSTL ASLSVSNAWF NGVQQTGYAL GTLANSNLKW
ETTDQLDAGI DASLLKGRLS VNLDFYYKKT YNLLLSAQIP GTTGYSSRLQ NIGTVQNKGI
ELTVEGTVLD RPDFTWDLGF NIAANRNKVL DLGRGLQHRE LTDGARLIVG KPAPVFYGLV
YEGTYKSQEE IDALPTPIPG LKPGFPKFRD VNGNGKYDGV ADYDIIGSPE PLFFGGFNTA
LRYKRLSMNA FFQYTYGNDV VNSFGPRLFM GEYASNVAAQ QTGRWTLENN QSDLPRVGSH
SVYSVNTQAY SFAVQDGSFL RLKTLQLNYN ISSERIKWLK NASIYVTGSN LFLLDRYKWG
YDPEVNSNGT NAVLRGFDGY SYPQNRSFIF GVNLKL
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