| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1761 |
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| Symbol | |
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| ID | 8225332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2162054 |
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| End bp | 2164363 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929615 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003086167 |
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| Protein GI | 255035546 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00472024 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.310787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG TTTATCTGCT TATTTGTTTG CAATTTTCGA TCCAATCGCT GGCCCAGACC
GGTGCGATTA AGGGGACCAT TACCACGTCG GACGGGGCGC CGGCGGAATT TGTGAATGTG
GTACTGAAAA AGACCGGCCG GGCGGCTGTT GTGAACCAGC AAGGGCATTA TACGATCGGC
CGCGTACCCG CTGGAAGCTA TATGGCGGTG GCGAGTTTCA CAGGGCTTCT GACCCAGGAA
CGGGAAGTGA CGGTTGCAGC CGGTGAGACG ACCGTTTTGG ATTTCGTGCT CGCGGAGGAC
AATCAGCAGT TGCAGGAAGT AATTGTGAAG GGCAATAGCA GGCTGGTGAA CAAGGAAAGC
GACAATGTGG CGCGCATGCC GCTCAAAAAC CTCGAAAATC CGCAGGTGTA CAATGTGGTA
GGCAAGGAAT TGCTGAAAGA GCAGGTCGTT ACCGTGATGA CGGACGCCCT GAAAGCCGCG
CCGGGCGTTG TAGCGGTATC CTACCCCAGC GGCGGGATCG GCGTGATGTC GCGCGGGTTT
GGGACGAGCA TCGGCGCACG CAACGGCTTG CAATCCGACC TGGGCCGTTC CAGCGCGGAT
GTTTCCAATA TCGAGCGGAT CGAGTTCATC AAAGGGCCGT CGGGCACGTT GTTCGGTGCG
AGCATTTCTT CATTCGGCGG GCTGGTGAAC CTGGTTACCA AGCGCCCGGG CGAAAATTTC
TTCGGCAATG TGTCGCTCAC TTTGGGTAGT TTCGGCTTGT CGCGTATCGC GGCCGACGTA
AACAGCCCGC TGAACAAAGA AAAAACCGTG ATCGCACGTG TGAATACCGC GCTGCACCGG
CAGAACAGTT TCAGTGATTT TGGCCGTACC AACAGCTTCG CATTCGCTCC GAGCCTGCTT
TTCAAAGCTA CCGACCGGCT GACGGTCCTT TTCGACGCCG AGATTTTCAA TGCCAATTCG
TCCCGGCCGA CCTACACGCG CTTCGGGCCT CAATCGGGCA TTACCAACTA CAAAGAGATA
CCGCTTGGCT ACCGAAAGTC GCTGTATGAC AACGACCTGG ATTCCAAAAC GCAATCGCAG
AAGTATTTTG TGGAAGCTAA ATACCAGCTC AACAGCGACT GGACTTCTTC GACCAACATT
TCCTATGTCA ACGAGTTTAC CGATTACAGC TATCAGACCT ATAATACCTG GATCACGAAG
GACCGCGTGG CGCGCTATGT CGGCATTTGG GGGCCTATTA AAAATACTTA TGTCAATGCG
CAGCAGAATT TTGTAGGGAA ATTTCAAACC GGCATGGTGA AACACACTTT GCTGGCGGGA
TTGAGCTACA CCAACTACTA CGCGAGCGGG ATGAGCAAAA GCGCGCCGAA TTTTGATACG
ATCAGCATTT CACAACCTTA CAAGCTCATC GACAAGGTGT ATTCCGACCG GATTTTGCTC
CAACCCGCGC GGGTAAGCAG TCGCGGTACG ACCAAAAACC AGTACATGGG CGCATATGTA
TCGGAGGTAG TGAACCTGGG CGACCGCCTG TATGCCATGC TAAGTCTCCG TTTCGACCGG
TTTATGCAAG CCACGGGCGG TTTTACGCCG GGTGGCTATG ACCAGAATTC GCTTTCGCCA
AAACTCGGCC TTGTATACCA GCTCGTCAAA AACAAGGTAT CGGTATTTGG AAACTATATG
AATGGCTTCC AGAACACCAA CCCGCAGATC GAACAACCCG ACGGATCCAT CCTGAATATC
AAGCCATTAT ATGCCAACCA GTGGGAAGCC GGTATCAAGA GCGAATGGCT CGACGGCAAG
GTGAATGCGA CATTGAGCTA TTACACCATC AATATCGACA ATGCCTTACG CACCGACGAC
AGCCGCTTTA CCCGCCAGGA CGGCAAGCAG CAAAGCAAAG GTTTGGAACT GGACATCCTC
GCCAACCCCG TGACCGGCCT GAATGTGATC CTCGGCTATG GGTACAATGA AAACCGGATC
GTAAAAGCGG AAGTGAACCA GGGCAACATC GTGGCAGGCG CCCCGAAAAA TATCGCTACC
TACTGGGTTA GCTACAAATT CAGCGGACAG GCGCTGAAAA ATCTCGGAGC GGGCATCGGC
GGAAATTATG CAAGCCATTC GTATTTCAGC GATGCCAATA CGGTCACCAT TCCATCGTAC
AGCGTACTCA ATGCGACCCT TTTTTATGAA AATGCAAAAT GGCGCACCGG CCTGAAACTG
AATAACATCG GCAACACGGA ATACTGGGAT TCGTACGGCA TCTACAACCC GACGCGGAAT
TTCACGGTCG ACCTGGCGAT CAAGTTTTAA
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| Protein sequence | MKNVYLLICL QFSIQSLAQT GAIKGTITTS DGAPAEFVNV VLKKTGRAAV VNQQGHYTIG
RVPAGSYMAV ASFTGLLTQE REVTVAAGET TVLDFVLAED NQQLQEVIVK GNSRLVNKES
DNVARMPLKN LENPQVYNVV GKELLKEQVV TVMTDALKAA PGVVAVSYPS GGIGVMSRGF
GTSIGARNGL QSDLGRSSAD VSNIERIEFI KGPSGTLFGA SISSFGGLVN LVTKRPGENF
FGNVSLTLGS FGLSRIAADV NSPLNKEKTV IARVNTALHR QNSFSDFGRT NSFAFAPSLL
FKATDRLTVL FDAEIFNANS SRPTYTRFGP QSGITNYKEI PLGYRKSLYD NDLDSKTQSQ
KYFVEAKYQL NSDWTSSTNI SYVNEFTDYS YQTYNTWITK DRVARYVGIW GPIKNTYVNA
QQNFVGKFQT GMVKHTLLAG LSYTNYYASG MSKSAPNFDT ISISQPYKLI DKVYSDRILL
QPARVSSRGT TKNQYMGAYV SEVVNLGDRL YAMLSLRFDR FMQATGGFTP GGYDQNSLSP
KLGLVYQLVK NKVSVFGNYM NGFQNTNPQI EQPDGSILNI KPLYANQWEA GIKSEWLDGK
VNATLSYYTI NIDNALRTDD SRFTRQDGKQ QSKGLELDIL ANPVTGLNVI LGYGYNENRI
VKAEVNQGNI VAGAPKNIAT YWVSYKFSGQ ALKNLGAGIG GNYASHSYFS DANTVTIPSY
SVLNATLFYE NAKWRTGLKL NNIGNTEYWD SYGIYNPTRN FTVDLAIKF
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