Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1758 |
Symbol | |
ID | 8225329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2158308 |
End bp | 2161109 |
Gene Length | 2802 bp |
Protein Length | 933 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644929612 |
Product | lipoprotein |
Protein accession | YP_003086164 |
Protein GI | 255035543 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.25404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA TTTATTTCCT TTTCAGCCTG CTTGTCATGG CAGTGTTGAA TGCCAGCGCG CAATTTATTA CCGTTTGGAA AACAGATAAT CCAGGCGTTT TCAACAACTC TTCCATTACG ATTCCCGCTA CCGGCAACCA ATATAGCATC GCCTGGGAGG AAGTGGGCAA CCCGGCCAAC AACGGCACGG CCACCGGATC AGGCACGCAA GTACTCTCAT TTCCGTCACC GGGTACATAC CAGGTGAGCA TTTCGCCGGG AAGCGGCACA TTCAGCAGGA TCGCCTTTGC CAATAGCGGC GACAGAAACA AGCTGCTGGA AATTAAGCAA TGGGGCGATA TCCGCTGGAC GAGTATGGAA AATGCTTTCC AGGGATGCAC CAACCTTACC ATATCGGCCA CCGATGCGCC CGATTTGCAA GATGTGGCGA GCCTGGCAGG GATGTTCGAA AGCTGCGCGG CGCTCGCCAC CGTACCGGAG ATCGACCAGT GGGATGTAAG CGGCATTACG AACATGGCCC GCCTGTTTTA CTTCGCCTCC ACCTTCAACG CGCCGCTCGG TAGCTGGAAT ATGGGGAGTG TGACGAACAT GCATCAGATG TTTCACAGCG CCAGTGCATT CAACCAGCCC ATTGGTAGCT GGGATGTGTC GAAGGTCACC AACATGAATT CGATGTTTTA CCAGGCCCGG GCATTCGATG AAAGCATTGA AAACTGGAAT GTTTCGAACG TGACGAATAT GGGTGCCATG TTTACGCTGG CCCCCGCTTT TAACAAGCCG CTGGAAAAAT GGAACGTGGG CCAGGTGACC GATATGTCCA ATATGTTTTA CGGCGCCACT TTGTTCAATC AGTCGCTGGA CCGGTGGGAT GTATCGAAGG TGCGGAATAT GACCGCCATG TTCGTGAACG CAACTGCATT TAACCAACCC CTCGGCCGCT GGAACCTGAA CGCCGTCACC ACGATGGTGC AAATGCTCCT GGGCTCGGGT ATGCAATGCG CCAGCATGAC CCTTACCTTG CAGGGCTGGG CAGGCAATGC GGCTACACCG GATAACATCA CCTTCGGCGC GAATGGCCGT AACTACGGCA GCCAGGCCGC TGCGGCATTG GCCACCTTGC GCGACACCAA AGGCTGGACG ATCGCCATCG GCAGCGAGGT CACCTGTGCG CTGCCGCCCC GGCCTTATGT TGCGGTATGG AAAACCGATA ATCCCGGCCG GACTGCCGAT AATCAGATCA TGATCGCGGC CACCGGCACC GGTTACAGTG TGGCCTGGGA AGAAGTGGGT AATGCGGCTA ACTTCGGGAC TACGACGGGA AGCGACTTGT TTACCCTCAC ACTGCCGCAT GCAGGAACCT ATCAGCTAAG CATTACGCCT GGCAACGGCA CTTTCACCGC AATTAGAATG TCGGCGAGGG ACCCTCAGAA GCTGTTGGAA GTCAAGCAAT GGGGAGATAT CCGGTGGTCG GACATGGAGC AGGCTTATTA CCGCTGCGTG AATATGACAA TTACCGCTGG CGACCTTCCC GATCTGCGCG ATGTCAGGTC TATGCGGGCG ATGTTTTCCG ACTGTCGGTT CACGACGGTG GCGGGTTTGG ACAAGTGGGA CGTAGGCAAC GTGACCGACA TGAGCGCGCT CTTTATGAAT TCGCCCGCGT TTAATCAGTC TATCGCAGAC TGGGATACTA AAAACGTCAC AGACATGAAC AACATGTTCA GCGGCGCAAC GAGTTTTAAC CAGCCGATAG GCCGCTGGAA TGTGAGCAAG GTCCGCAACA TGACCAGGTT ATTCTTGAGT GCGCATGCAT TCAATCAGCC GATAGGGGAT TGGGACGTTT CCCAGGTCGG AGCCATGGAG GCAATGTTCC GGAACGCCTT TGCTTTTGAC CAACCGATCG GCGACTGGAA TGTATCCTCG GTAACCGATA TGTCCTATAT GCTGCTGGGG GCCAGAAGTT TTAACCAGCC ACTGGAAAAC TGGGACGTCC GCCAGGTCCG TAATTTTTCG CACATGATGT TCAGCGCAGA TGCTTTCAGC CAGGAACTGG GTAAATGGAA CTTGTCGAGT GCGATCAACC TGACCGGGAT GCTGTCGCAT TCGGGGATGG ATTGTGAGCA TGTGAGCCGC ACTTTAATGG CCTGGGCGGC GAACACCGAA ACACCGGACG GTCTTACACT AGATGCGCAG GATGTTGCTT ACGCCAGCGC CGCCCGCACA TCGATCGATT ACCTGCGCGA CACGAAAGGC TGGACGATCA CCCTGGGCGC GGAAGTGCCA TGCGCCGCGC TGGACGTTTC GCTCGTTAGT TTCAATGTGA GCAAAGCCGG CGGGCAGGTG AAAGTGAACT GGATCACGGC ATCCGAAACG GATAATGATT ATTTCGAAAT CGAGCGTTCT GCCGATGCGC GCACGTGGAC GTCCATTGCA CGCATAGACG GCGCAGGTAC CACCACTACC ACGCGCATTT ACAGCCACAC CGACGTCGCC CCGCTCTCTC CAAAGGCGTA TTACCGGTTA AAAACAGTCG ACCTGGCGGG GAAGACGGAA TACTCAGCGA TCAGGGCCGC GGTTTTCGCC GAGCGCGAAG AAAGGTTCAT TTATCCCAAT CCTGCCACTA CGTCGGCGAC CTTTTCAGGC AAGCCGGGCA GTGTGGTGCA GATTTACAAT GCAACAGGCC GGAAGGTGCT TCAAATCACC CTGATTTCAG AAAAAACGAC TATTCCGTTA AGCGGCCTCC CGGGCGGGGT TTATTTAATC CGGTCGGATG AAGGATGGCA GGGGAAGTTC GTTAAAAAGT AA
|
Protein sequence | MKKIYFLFSL LVMAVLNASA QFITVWKTDN PGVFNNSSIT IPATGNQYSI AWEEVGNPAN NGTATGSGTQ VLSFPSPGTY QVSISPGSGT FSRIAFANSG DRNKLLEIKQ WGDIRWTSME NAFQGCTNLT ISATDAPDLQ DVASLAGMFE SCAALATVPE IDQWDVSGIT NMARLFYFAS TFNAPLGSWN MGSVTNMHQM FHSASAFNQP IGSWDVSKVT NMNSMFYQAR AFDESIENWN VSNVTNMGAM FTLAPAFNKP LEKWNVGQVT DMSNMFYGAT LFNQSLDRWD VSKVRNMTAM FVNATAFNQP LGRWNLNAVT TMVQMLLGSG MQCASMTLTL QGWAGNAATP DNITFGANGR NYGSQAAAAL ATLRDTKGWT IAIGSEVTCA LPPRPYVAVW KTDNPGRTAD NQIMIAATGT GYSVAWEEVG NAANFGTTTG SDLFTLTLPH AGTYQLSITP GNGTFTAIRM SARDPQKLLE VKQWGDIRWS DMEQAYYRCV NMTITAGDLP DLRDVRSMRA MFSDCRFTTV AGLDKWDVGN VTDMSALFMN SPAFNQSIAD WDTKNVTDMN NMFSGATSFN QPIGRWNVSK VRNMTRLFLS AHAFNQPIGD WDVSQVGAME AMFRNAFAFD QPIGDWNVSS VTDMSYMLLG ARSFNQPLEN WDVRQVRNFS HMMFSADAFS QELGKWNLSS AINLTGMLSH SGMDCEHVSR TLMAWAANTE TPDGLTLDAQ DVAYASAART SIDYLRDTKG WTITLGAEVP CAALDVSLVS FNVSKAGGQV KVNWITASET DNDYFEIERS ADARTWTSIA RIDGAGTTTT TRIYSHTDVA PLSPKAYYRL KTVDLAGKTE YSAIRAAVFA EREERFIYPN PATTSATFSG KPGSVVQIYN ATGRKVLQIT LISEKTTIPL SGLPGGVYLI RSDEGWQGKF VKK
|
| |