| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1756 |
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| Symbol | |
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| ID | 8225327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2150765 |
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| End bp | 2157172 |
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| Gene Length | 6408 bp |
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| Protein Length | 2135 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929610 |
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| Product | Fibronectin type III domain protein |
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| Protein accession | YP_003086162 |
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| Protein GI | 255035541 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.527885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGAA AACTACATTA CTCAATTCGT TTCTTTATTG CGCTCATCTT TTTACTGGGC
GTGGCCGGCA TTCCGGTCGT CGCCCAGAAC GCGATCGTGA CCGAAAACAC CCTGCCCGGC
AGTCCTCCCT CGGAATGGGA CGTGGATGGG TCCGGCGACC TGAGCATCCA GGGCTTCGCC
ACCGACATCA GCTACAACAG GGGCGAAACC GCCGTATTCA AAATTAAAAC AGACGCGACG
GGGTATACGG TCAAAATTTA CCGGCTCGGC TACTACCAGG GCAACGGCGC TTCCTTTAAA
GGCGACGCCA CCATTACAGC CAGCAGCTTG CCGCAGACGC AGCCTACCTG CCTGACTAAC
CCCACGGGCC TGGTCGATTG CGGCAACTGG GAGGAATCCG CCCGCTGGGA CATCCCCACC
AGCGCCGTTT CGGGCATTTA CATCGCCAAG CTGCAGCGTA CCGACACCCC CGAGGGCGAA
GATCCGCGCG CAAGTCACAT TACATTCGTC GTCCGCGACG ATGCCAGCAC CGCCGACCTG
TTTTTCCAAA CCTCGGATGC AACGTGGCAG GCCTATAATG TGTATGGGGA CAACGATAAC
GGCAGAAGCC TCTACACCGG CGTAAACGGC ATTGGTAAGG CCTCGAAAGT GAGCTATAAC
CGGCCGTTTC TTACCCGCAC CGGCGGAGGC GGCGGGGGCG CTTATGAAGA TTTTCTGTTC
AATTCGGAGT ATCCGATGAT CCGGTTTCTC GAAAAGAACG GGTACGATAT GAGCTACACC
ACCAATATCG ATACCGACCG CCGCGGCGAG TTGATCCTGA ATCATAAGGT TTTCATGTCT
GTCGGCCATG ATGAATACTG GTCGCAGGCC ATGCGGAATA ACGTTGCCGC GGCCCGGAAT
GCCGGTAAGC ACCTGGCGTT TTTCAGCGGC AATGAAGTGT ACTGGCGCAC GCGTTGGGAA
AACAGCATTA GCACTGGTGA GGCCGACCGC CGCACGCTGG TGTGCTATAA GGAAGGCGCC
GAAGGCGAGA ACCAATGCAA CGGCAAGTGC GATACCAGCT CTCCGGAATG GACGGGATTG
TGGCGCAGCG GCTGCGAGTA TACCGGCTCG GGCGGTTGCA ACCCCGAAAA CGAGCTGAGC
GGACAAATCA GCTGGGACGG CACCACGGGC ACCATACAGG TACCGAGCAA CTACAAAAAC
CTGCGCTTCT GGCGCAATAC CAGCGTAGCG CAATTGAGCG ACGGCAGCTC CGAAACGTTG
ACAGCCAACA CGCTTGGCTA CGAATGGAAC CCCGAACAGG AGAATTACCG CAGCAGCTAT
CCGGCCGGCC GCATCCTTCT TTCCCGCTCT GTGGTAGCTG GTAAAATACA CCATTTGAGC
CTATACAAGC ATTCCAGCGG CGCGCTCGTA TTCGGCGCGG GAACCGTACA ATGGACGTGG
GGCCTCGACG ACCAGCACGA CCGTGGCAAC GAGCCCGTGA GCCGGACGAT GCAGCAGGCG
ACGATCAACC TCTTTGCCGA CATGGGCGTA CAGCCTGCCA CACTCCAGAC CGACCTTACC
GCCGCATCCG AGTCCGACGA CGACACGGCC CCGACGGTGG CCATCACCGC TCCCGCTGAG
GCCGGCAATG TGCCCGTAGG CTCCGTAGCG ACCATTACCG GCACCGCTGC CGATGGAAAG
GTAATTGCAG GTGTGGAGGT GTCCACCGAC AACGGGGTAT CCTGGCGCCT TGCTACCGGC
ACCAACGCCT GGACATTCAC CTGGGTACCA TCCCAGCAGG GCGCAGCGAC GATACGAGCC
CGCTCGTTCG ACGATTCGGG GAACATCAGC GAGGTGGCGA TCACAAACGT GAATGTCTCC
GAACCCGAAC CACTTCCCTG CCCCTGCACC GTGTTCCTGC CGACGGATGT GCCCGACGGC
AATGTCCACA ACGACGGCGG GCGGGCGATC CAGCTGGGGA TGAAGTTCCG CTCGGCGGTG
GCCGGCTTTG TTACCGGGGT ACGTTTTTAC AAACATCCGA GCAATACCGG CACGCATATC
GGGCAGCTTT ACAGCAATGC GGGTGTGCTG CTTGCCGAAG CTACTTTTGT TAATGAAACA
GAATCGGGAT GGCAGCAGGT GCAATTCGGT GCGCCGGTGG CCATTTCTTC CAATACCACC
TATGTGATTT CCTACCACAG CAGCCAGGGT TACTACTCGG CCATGGACTC GTATTTCCAG
GTCCCTAAAC AAACCGGCGC GCTGAAAGGC CTTGCCAATG AAGAGGATGG TAAAAACGGC
ATTTACATAT ATTCGGCAAC ACCCGCTTTT CCTAACAGCA ACTACGAGTC AAGCAACTAC
TATGTGGATA TAGTTTTTGA GACTGAAAGC GGTCCGGACA CTGCGCCGCC AACGGTAACT
ATGACCTCAC CGGGGGCGAA TGCTACGGGC ATCCACATCA ATAACAACAT TACCGTGCGG
TTCAGCGAGG GTATCGATGC CGCCACGGTG TCGGGCGCGA GCGTCGTGCT GAGCAGCGGC
GGGCAGGAGG TCCCGGCCAA TATCACTTAC GATGCAGGCA GCCTGACCGT CACCATCGAC
CCCGCTTCGG CCCTGGGCTA TGCAACCGTG TACACCCTGC TCGTGAAAGG CGGCGGTGCC
GATCCCCGCA TTAAAGATGT GGCTGGCAAT GCATTGGCGG AAGATTTCAG CTTCTCGTTC
ACTACGCAGA ATGCGCCCGG ACCATCGCCG AACGATGGCC CCGGCGGACC GATCCTCGTG
CTCAGCGCAG GCGCGAACCC GTTCAGCAGG TTCCCGGTTG AAATACTGCG GGCAGAGGGT
TTAAATGCAT TTGCCGCCAA AGACATTTCT GAAATCAGCG GTAACCCGGC GTTGCTGGAT
GCCTACGATG TGATTGTTTT GGGAGAAATC GGATTATCGG GTGATAATAT CAACGCCCTC
ACCGCCTGGG TGAATGCCGG CGGGACACTC ATTGGCCTCA GACCGGCAGC TGGCCTGGCG
TCGCTATTCG GTATATCGCC GGCGGGAGGC TCGCTGAGCG ACCGGTACCT GAAAGTAAAT
ACTGCCACCG GGCCCGGCGT GGGCATCGTG GACGAAAGCA TCCAGTTCCA CGGCACCGCC
GACCTCTACA CGCTGGCTGG CGCAACGAGC ATTGCCACCC TGTATTCCGA TGCTACCAAT
GCCACGATCA ACCCGGCTAT TACCCTCAAT AATGTCGGCC CGAATGGAGG TAAAGCCATC
GCATTTACCT ACGACCTGGC ACGGTCCATT GTGTACACCC GCCAGGGCAA TCCCGCCTGG
GCAGGCCAGG AACGCGACAA TCAGAGCGGC CCGATCCGTT CCGACGATCT GTTTTTCCCC
GACTGGATCG ATCTAAATAA GGTAGCCATT CCGCAGGCCG ACGAGCAGCA GCGCCTGCTG
GCCAACCTGA TCCTGCTGGG TAATTTGCAC AAAAAGCCTT TGCCACGCCT CTGGTACCTG
CCGCGCGGAC TGAAAGCGGC TGTGATTATG ACCGGCGACG ACCACGGTAG CGGCGGTACA
ATAGGGAGAT TTGACGATTA TATCAGCAGA AGTGCGGCTA ACGATCAGCA GGCAGTCGAT
AACTGGACGG CGATCCGGGG CACTTCCTAC ATTTACCCCA ATACGCCTAT CACCAACGCC
CAGGCATCCG CATTCCAGGC GCAGGGCTTT GAAATAGGTG TGCATTTGAA TACCAACTGT
TCCAACTTCG ACGAAACATC GCTGCGCGGA TTCTTCAATA CCCAGCTCGC GCAAATGACG
AACAACTTCC CTGGCTTGTC GCCCACGATA ACGCTGCGGA CGCATTGCAT TGCGTGGAGC
GACTGGGCTA CGATGGCGAA AGTGGAGCTG GAAAACGGCA TACGCCTCGA TGCGAACTAC
TATTACTGGC CCGGCAGCTG GGTTGCCGAC CGGCCCGGCA TGTTCACCGG CTCGGGAATC
CCGATGCGGT TTGCAGACCT CGACGGCTCG CTGATCGACG TGTACCAGGC GGCCACGCAA
ATGACCGACG AATCGGATAT GTCCTACACG AAGCACATCA CCACGTTGCT AGACAATGCA
TTGGGATCCA GAGGCTACTA CGGCGTATTT ACCGCCAACA TGCATACCGA TGCCAGCGGA
TCGACCGGTT CGGACGTGAT CATTACGGAG GCGCAGGCGC GGCAGGTGCC CGTCATTTCC
GCCAGACAAA TGCTCACCTG GCTCGACGGC CGGAACAATT CTTCATTCGG TGCTTTGAGC
TGGACAGGCA ACACGCTGAA CTTCACGATC TCCGCGGCAG CAGGCTCGGG CAGCATGCAG
GCGATGGTAC CTACCGAAGC CCAAAACGGG CATTTAGTAG GCATCACCGT CGACGGAAAT
ACAGTGAGTT ATTCCACACA GGTGATCAAG GGCATTTCCT ATGCATTTTT CCCCGCCAAT
AACGGCAGCT ATGTTGCCAC CTATGAGGTA ACAGAAACCA ACCAAGCCCC GCAGATCTCG
AACGTGACGG TGACACAGCC GGTAGCAGGC TCCGCCACCA TTACCTGGAC TACCGACGAG
CCCGCCGATT CGCGCGTGGA TTACGGCACA AGTGGCGACG CATTGACCCA AAACTCGGCC
ACTACCACGC CTACCACCAG CCACTCCGTC ACGCTCACAG GCCTGCTGCC CGGTACCACC
TACCATTTCC GGGTGACCTC CGCCGATGAA CTGGCGGCTT CGAGCACGTC GCCGGCTTCT
TCCGATGCGC CGCTGAGCTT TACCACCGCG CCCAACGCCG ATCCGGCCTG CTTCGAGGAC
CTTACCGCCG CTCATTTCAG CGAAGGAACA ACGGGCACCG GCACGCTGGT TACGGCTGGC
GGCGTCACGC TGAAACCGAT TATCGTGGAA GATTTCACAA ACCTTCCGCC GACAGAACAA
TGGCAAAGCT TCCCGTGGGA CGGCGGCGGC TCGTCCACCA TTTCGGACGG CCAGCTGGTG
GTGAATGGTG CGCGGTTCAA CACCGAGCCG GTGGGCAACA CATTATCACC CGGCACTTCG
ATTGAATTCG TAGCTACGTT CGGGGCTTCT ACTTTCCAGC ATATCGGGCT TGGCGCGGGT
AACAATACGG ATATGTATAA CTCGGCAGGC ACCTGGATCA TGTTCAGCAC AGGCGCTAGC
GGTGCCATGC AGGCGCGGGT GAACCTGAAC AACTCGCCCG AAGATGTAAA CCTGGGCGGG
GGCCTGATCG GCACGCCTCA CCTCTACCGG ATCGAATGGA ACGCAACGAA TATCCTTTTT
TACGTGGACG GCACGCTCGT TCATACCAGC TCGAAGGTTA TTTCCACGCC AATGCGCTTC
GGTATCAGCG ATTATCACAT GGGCGCACCG GGCGTGAGCA TTGATTGGGT ACGCATTACC
CCGTATGTTC CTTCGGGCAG CTTCACATCC CGCGTGTACG ATGCCGGCGG AATCAAAACG
TGGCAGACAG CTAACTGGAC CACCACCCTA CCCGAGGGCA CCAGCGTGCA GCTTTTGCAG
CGGCAGGGCA ATGTGGCCGA ACCGGACGAT TCCTGGTCGG CATTCACGTC CATCCCGGGC
AGCGGATCGA CCGTGGGCGG CTCCTCGCGC TACATTCAGT ACCGTGCAGA CCTTTCGACT
TCGAATACGG CCGTTACGCC GGTGCTGCAA AGCGTAGCCA TCCACTGTGC CGATCCTGTG
GTGACCTGTA ATGCAGGCAC CGAGCAGGTG GCGCTTTCGG CGAATGCGAT CACCAATACG
TGCCCGGTTA CGACGGTCAA TCTCAGCAGC CTTGTTACCG GGACATTGCC GGAGGGCGTG
CTGGCGGTGT TTTACACAAC AGCCGACCAC CAGGAAGGTA CCCAAGTAGC CGATCCGCTG
GCCGCACCGG CTTCCGGCAC TTATTATGCA TTCTATTTTG ATACCCACAA TTCCTGCTTC
AACACGGCTA ATTCTACGGC CATCGTGACG GCAACGGCTA CCGACTGCAC CATTCCGACC
GACCTGCGGC CTTACCTGGT GATGGATCAT GTAGAATTCA CCGCAGATGC TGTCACCAAT
CCGCTTTCGC TGCGGGTGAG GAACACGAAG GTCGGCAGCA ATGCGACGGC GCGCATTTAT
GTACAAATCT ACAAGCCGGT CCCTGGTGCT ACCATCGCGC TAACGGGCCA GGCGGCTGTG
GACTGGGTTC AGGAGAGTGA AAATGCGAAT TATTACGAAT TCTACACCGA CGTGGACATT
CCCTACGCCC CAACAGGCGG GTATGTGATC ACGGCGACGC TCACTATTCC GGCGGCGGCG
ACTAATGGTG CCTACGATTT CAAGGCATCC ATCAAGGACA ATTCCGGAGG CGAAGATCCT
GCCAGTTACA CGAATAACAA CGTGGTTATA GGCGTGTCGA AACAATAG
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| Protein sequence | MLRKLHYSIR FFIALIFLLG VAGIPVVAQN AIVTENTLPG SPPSEWDVDG SGDLSIQGFA
TDISYNRGET AVFKIKTDAT GYTVKIYRLG YYQGNGASFK GDATITASSL PQTQPTCLTN
PTGLVDCGNW EESARWDIPT SAVSGIYIAK LQRTDTPEGE DPRASHITFV VRDDASTADL
FFQTSDATWQ AYNVYGDNDN GRSLYTGVNG IGKASKVSYN RPFLTRTGGG GGGAYEDFLF
NSEYPMIRFL EKNGYDMSYT TNIDTDRRGE LILNHKVFMS VGHDEYWSQA MRNNVAAARN
AGKHLAFFSG NEVYWRTRWE NSISTGEADR RTLVCYKEGA EGENQCNGKC DTSSPEWTGL
WRSGCEYTGS GGCNPENELS GQISWDGTTG TIQVPSNYKN LRFWRNTSVA QLSDGSSETL
TANTLGYEWN PEQENYRSSY PAGRILLSRS VVAGKIHHLS LYKHSSGALV FGAGTVQWTW
GLDDQHDRGN EPVSRTMQQA TINLFADMGV QPATLQTDLT AASESDDDTA PTVAITAPAE
AGNVPVGSVA TITGTAADGK VIAGVEVSTD NGVSWRLATG TNAWTFTWVP SQQGAATIRA
RSFDDSGNIS EVAITNVNVS EPEPLPCPCT VFLPTDVPDG NVHNDGGRAI QLGMKFRSAV
AGFVTGVRFY KHPSNTGTHI GQLYSNAGVL LAEATFVNET ESGWQQVQFG APVAISSNTT
YVISYHSSQG YYSAMDSYFQ VPKQTGALKG LANEEDGKNG IYIYSATPAF PNSNYESSNY
YVDIVFETES GPDTAPPTVT MTSPGANATG IHINNNITVR FSEGIDAATV SGASVVLSSG
GQEVPANITY DAGSLTVTID PASALGYATV YTLLVKGGGA DPRIKDVAGN ALAEDFSFSF
TTQNAPGPSP NDGPGGPILV LSAGANPFSR FPVEILRAEG LNAFAAKDIS EISGNPALLD
AYDVIVLGEI GLSGDNINAL TAWVNAGGTL IGLRPAAGLA SLFGISPAGG SLSDRYLKVN
TATGPGVGIV DESIQFHGTA DLYTLAGATS IATLYSDATN ATINPAITLN NVGPNGGKAI
AFTYDLARSI VYTRQGNPAW AGQERDNQSG PIRSDDLFFP DWIDLNKVAI PQADEQQRLL
ANLILLGNLH KKPLPRLWYL PRGLKAAVIM TGDDHGSGGT IGRFDDYISR SAANDQQAVD
NWTAIRGTSY IYPNTPITNA QASAFQAQGF EIGVHLNTNC SNFDETSLRG FFNTQLAQMT
NNFPGLSPTI TLRTHCIAWS DWATMAKVEL ENGIRLDANY YYWPGSWVAD RPGMFTGSGI
PMRFADLDGS LIDVYQAATQ MTDESDMSYT KHITTLLDNA LGSRGYYGVF TANMHTDASG
STGSDVIITE AQARQVPVIS ARQMLTWLDG RNNSSFGALS WTGNTLNFTI SAAAGSGSMQ
AMVPTEAQNG HLVGITVDGN TVSYSTQVIK GISYAFFPAN NGSYVATYEV TETNQAPQIS
NVTVTQPVAG SATITWTTDE PADSRVDYGT SGDALTQNSA TTTPTTSHSV TLTGLLPGTT
YHFRVTSADE LAASSTSPAS SDAPLSFTTA PNADPACFED LTAAHFSEGT TGTGTLVTAG
GVTLKPIIVE DFTNLPPTEQ WQSFPWDGGG SSTISDGQLV VNGARFNTEP VGNTLSPGTS
IEFVATFGAS TFQHIGLGAG NNTDMYNSAG TWIMFSTGAS GAMQARVNLN NSPEDVNLGG
GLIGTPHLYR IEWNATNILF YVDGTLVHTS SKVISTPMRF GISDYHMGAP GVSIDWVRIT
PYVPSGSFTS RVYDAGGIKT WQTANWTTTL PEGTSVQLLQ RQGNVAEPDD SWSAFTSIPG
SGSTVGGSSR YIQYRADLST SNTAVTPVLQ SVAIHCADPV VTCNAGTEQV ALSANAITNT
CPVTTVNLSS LVTGTLPEGV LAVFYTTADH QEGTQVADPL AAPASGTYYA FYFDTHNSCF
NTANSTAIVT ATATDCTIPT DLRPYLVMDH VEFTADAVTN PLSLRVRNTK VGSNATARIY
VQIYKPVPGA TIALTGQAAV DWVQESENAN YYEFYTDVDI PYAPTGGYVI TATLTIPAAA
TNGAYDFKAS IKDNSGGEDP ASYTNNNVVI GVSKQ
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