| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1754 |
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| Symbol | |
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| ID | 8225325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2144899 |
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| End bp | 2148933 |
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| Gene Length | 4035 bp |
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| Protein Length | 1344 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929608 |
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| Product | histidine kinase |
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| Protein accession | YP_003086160 |
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| Protein GI | 255035539 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.176495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACCGGA ATTCGGTTAC ATTTGGAGAC AGGCTGATCA TCATTTTCGT GGAAAAAACT
TTTGTACGGA TCACAAAACT GGTTTTTTGT GTAAGCTGCC TTTTGATTTT ACACCCATCG
CAGACCTGCT TTGCACAGCG GCCTGTTTAT TCGAATGAAC AGCATTTCGG CGTGGATGAC
GGTTTGCCGC AAAGCTTCAT CACAGGCTTC ACGCAGAATA AGGATGGTTT TATATGGATC
TCCACGCTCG ACGGGCTGAG CCGGTTTGAT GGACGCGGCT TCAAAAATTT CCGCAACAGG
CCCGGCGATC CCGCCACGAT CGCGCAAAAT GTGATTTTCA AAATTATTCC GCACGCCGAC
AGCAGCAAAC TGACACTGAT TTACGAAGGC TTGCACCATG ATTGTTTCGA TACGCGGACG
TTCCGGGCCA AGCGGATTCC CCACCTGGCC ACGCTGCGGC GCATCCCCGG TACCAAAGCG
CATTTTATTA ACCGGGCGAA TGTGTACAAT GGCGAAGACT GGGTTTTCGC AAGATCTGTT
GCCGGGGGGA TCGGATGGGT AAATGCCGAA ACAGGCAAAA CTTTTTTCGC CAACACGGCC
AACGGATTGT TGAAGCAGGA CACCCTCAGC GTTATTTTTC AATCAGCCGA TGGCGGCGTT
TTCTTGATCT CGGAGGATGG GGTGCAGGTG AGTGACAAAG CAAAAAAGCA TTTCAAATTC
ATCCGTTTCA ATACCTCCGT AGATAGGCTC CGGCCCGAGA TGATCTTCGA CGGAAACATC
AATGCGGGTA CTGTTGCGCG CCTGCCCGGA AACCGGTTGC TGGTTTACCG GGATAACCGG
GTCGTGCTCC TCGACCTGGT GAAAAGAACT TCGAAGTCCA TTACAATCCC GGGCGGCGTG
CCGGCTTATA ATAACAGCCA CAAGGATTTG CTTTGCCAGG ATTCGAAGGG ACTTGTTTAC
CTCGTGAACC AGGGCAGGGT TTTCAGGGTG AACGAAAAGG ACCAGCTGGA ACTGATCTGG
CAGAGCGGGT CGGCGCCGCA ATTCAATGTT ACCGCATTTT TTGTCGATCG GTCCGATGTG
CTGTGGATGA GCATTAACAC GCACGGAATC ACCAAGATCG ATTTACGCGC GATCCCTTTT
TACACGCGTC CTTACAAAAG CGGTTTTGTG GCCGACATTT TAGAGGAGGC GGGAATTCCA
CCACCCCAAA TCCCAGCAGA ATGGACTGAT TCTGCAATTG ACTACTACTT TCGGCAGGCA
TGGGCGTCTG ACAACCAACT TTATCTCACG GCCAATCTGT GGGGTAATGG TGAGATTTTT
AGCTACGACG GCGCCACGTT AAGCCGCTTC AATCGGGCCA GGCATTCGAA AGTCTACACG
GCGCTGGTCG TGAAGCCCGG AGGGGAAGTG TGCGCGTTCG AGCAAATGAA CTCGCGGTGG
TATAGCTGGA AAGCCCCGGC GTCGGCGCCG GATTCGTTTT CGCTGAACCG TGCGGAAATG
ATGAAGGTGG AAATGACGGA CGGCTACTTC GCGAAGGGCA GCCTCTGGCT GGCAACCTAT
GCCAGCGGTT TGCTCCAATA CAAAGATGCT CAAAGGATCG GGCACTTTAT CGGCAAGCAG
CCGGGCTCGC GGGGTCATAT GCCGAACGAA CTGACCGAGA TTTGTTCTGA CCCGTTGAAT
AAAAACCTGT TATGGATCGG TTCGCGGGGA TTTGGGCTCA TTCTTTGGGA TGTTGAGAAG
GGGTTGCAGC AGATTTTTAC CGTGGATGAC GGGCTGCCCA ACAATACCGT TTACTGCATT
CTGCCGGACC GGGCCGGCAA GTTGTGGTGC AGTACCAACA AAGGAATTTT CCGGCTTGAC
CCCAAAACGA AGGAGATCCA TTCTTTCGAC AAATCGGACG GATTGCAGGG GAACGAGTTC
AACCGGGCGC ATAAGTTCCG TTTTTTCGAC GGGCGCCTGG CTTTCGGCGG TACGGAAGGG
TACACGATAT TTGATCCCGC CGCCTTCGAC GGGAACCATC CCCGAACCCG AATGCCGATT
CAACTCATCA GCTTACAGAT CAACAACGAG TTACAGCAGC CGTCGCTTCG GGGCAGTATC
GTTGCTGAGC CGCTGAGCCT GATCCGCGAG ATAACCCTTC CGTTTGATAA AAACCATTTG
CGGTTCGAAT TTGCGGCATT GCGTTTCAAC CAGCCGGCCA AAACGAAATA CCGCTTTCAG
ATGGTGGGAA TTGATAAGCA GTGGGTAGAA AACGGCACGA GCAATGTCGC TTCGTATCTC
GGCTTATCGC CCGGCAAGTA CAAACTGCTC GTGAATGCGA CGGACAATAT GGGTTTATGG
GGTAAAGATT TCAAGGAAAT CAGCATTGTG ATCCGTCCTC CTTTCTGGGC CACGATGTGG
GCTTACCTGA TCTATGCATT GGTACTGGTC GTGATCGTCT GGCGCTATCT GGTTTTCAAA
GAGGAACGGA TGATCACGCG GCAAAAGCTG GCATTCGAAA AACGGGAGGC CTTGCGGCTG
AAAGAAATGG ACGAGTTGAA AGATCGTTTT TTCAGCAACA TAACCCATGA ATTCAGGACG
CCGCTTACTT TGATCATCAG TCCGTTGCAG AAATTACTTT CGGAAGGAGC AGTGTCCGGG
CCGATCCGGC AAACGCTGCG GGGCATCGAG AAAAACTCCC GCCAACTGCT GGGCCTGGTT
AACGAGTTTC TGGATTTCTC CAAATTGAAT GACGGGCAAA TGCAGGTGAA CAGATCCGCC
GGTGAGCTGG CCCCGTTTGT ATCCGCCCAC GTCCGGTCTT TCGAAGCGGC CGCTTCGGAA
AAGCAGATAA CACTTTCCTT TGCTTCCGGC GACGTGGAGG GTTTCTACCT CTTCGATCAG
GAAAAATGGA GCAAAATTGT CATCAACCTG CTAGGTAATG CATTGAAATT CACTCCGGAA
AAAGGAGCAA TTTCGGTTGG GCTGAGGCAA GCGTCGGGAG ATTGTATCGT GTTGGAGGTT
TGGGATAATG GCCCCGGCAT TGCGACCGAT CAGCAGGAAA GAATATTCGA AAGGTTTTAT
CAGGTCGATG GGTCGGCTAT CCGCAGCCAG GGCGGCACAG GTATCGGTCT GGCGCTGGTG
AAGGAAATGG TAGGGGTGAT GGGAGGACAT ATTCAGGTGG ATAGCGAGCC GGGAAAATAT
GCCCGGTTTT GCGTTGAGCT GCCGGTGCCA AAGGCCCTTT CGCCTGAAAA TACAACTTTG
AACAGCGATA CGCCGCTATT CCGCCCTGTG CCGATGGACG GTGCATTACC TCAGCTATTC
GTGGTGGAGG ACAACGACGA GCTTCGCGCA TTTATCATGA CAAGCCTGGA AGGGGCGTAT
CGCGTGACCG GCGCCGCCAA CGGAATGCTG GCCTGGGAAA TGATCCGCAC CTCATTGCCG
GACATCGTGA TCAGCGACGT GATGATGCCC GGCCGCGACG GGTTTGATCT CTGCAAGCTG
TGCAAGTCGG ACCCGCTTAC CGCCCACATT GGTTTTATCC TGCTCACTTC CAAGGCCGCT
CACCAGGCAC GCATTCATGG ATTGGAAGCA GGTGCCGACG TTTATCTGAC CAAGCCATTT
CAAATGGACG AGTTGGAGCT GCGGGTGCTG AACCTTTGCC GGTTGCAGCA GAATGTTCGT
GCACAATTGA AAGCCCGATT ATTCAGTCAG CCGCCCGAGG CGGGTCCGGG GATCACAGAC
CCGTTCCTGA ACCGGTTGTA CCAGGAGATC GACGCCAGGC TCGCTAATCC CGACCTCATG
GTAGACGATC TGTGCAAGGC ACTTTCGGTG AGCAAAAGTA CGCTCAACCG CAAACTGAAA
GCCCTGCTGG ATGCTTCCGC TGCCGACCTG ATCCGTCAGT ACAGGCTGGA AAAGGCAACG
ACCCTTTTGC GATCGGGGAT GGATATTGCA TCGGTGTCCT ACAATGTGGG CTTCGGGAGT
CCGTCCTATT TCACGCAATG CTTCCGGGAG CGGTACCACC TCACGCCGTC GGATTTTATT
TCCGGCGGCA TTTGA
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| Protein sequence | MNRNSVTFGD RLIIIFVEKT FVRITKLVFC VSCLLILHPS QTCFAQRPVY SNEQHFGVDD
GLPQSFITGF TQNKDGFIWI STLDGLSRFD GRGFKNFRNR PGDPATIAQN VIFKIIPHAD
SSKLTLIYEG LHHDCFDTRT FRAKRIPHLA TLRRIPGTKA HFINRANVYN GEDWVFARSV
AGGIGWVNAE TGKTFFANTA NGLLKQDTLS VIFQSADGGV FLISEDGVQV SDKAKKHFKF
IRFNTSVDRL RPEMIFDGNI NAGTVARLPG NRLLVYRDNR VVLLDLVKRT SKSITIPGGV
PAYNNSHKDL LCQDSKGLVY LVNQGRVFRV NEKDQLELIW QSGSAPQFNV TAFFVDRSDV
LWMSINTHGI TKIDLRAIPF YTRPYKSGFV ADILEEAGIP PPQIPAEWTD SAIDYYFRQA
WASDNQLYLT ANLWGNGEIF SYDGATLSRF NRARHSKVYT ALVVKPGGEV CAFEQMNSRW
YSWKAPASAP DSFSLNRAEM MKVEMTDGYF AKGSLWLATY ASGLLQYKDA QRIGHFIGKQ
PGSRGHMPNE LTEICSDPLN KNLLWIGSRG FGLILWDVEK GLQQIFTVDD GLPNNTVYCI
LPDRAGKLWC STNKGIFRLD PKTKEIHSFD KSDGLQGNEF NRAHKFRFFD GRLAFGGTEG
YTIFDPAAFD GNHPRTRMPI QLISLQINNE LQQPSLRGSI VAEPLSLIRE ITLPFDKNHL
RFEFAALRFN QPAKTKYRFQ MVGIDKQWVE NGTSNVASYL GLSPGKYKLL VNATDNMGLW
GKDFKEISIV IRPPFWATMW AYLIYALVLV VIVWRYLVFK EERMITRQKL AFEKREALRL
KEMDELKDRF FSNITHEFRT PLTLIISPLQ KLLSEGAVSG PIRQTLRGIE KNSRQLLGLV
NEFLDFSKLN DGQMQVNRSA GELAPFVSAH VRSFEAAASE KQITLSFASG DVEGFYLFDQ
EKWSKIVINL LGNALKFTPE KGAISVGLRQ ASGDCIVLEV WDNGPGIATD QQERIFERFY
QVDGSAIRSQ GGTGIGLALV KEMVGVMGGH IQVDSEPGKY ARFCVELPVP KALSPENTTL
NSDTPLFRPV PMDGALPQLF VVEDNDELRA FIMTSLEGAY RVTGAANGML AWEMIRTSLP
DIVISDVMMP GRDGFDLCKL CKSDPLTAHI GFILLTSKAA HQARIHGLEA GADVYLTKPF
QMDELELRVL NLCRLQQNVR AQLKARLFSQ PPEAGPGITD PFLNRLYQEI DARLANPDLM
VDDLCKALSV SKSTLNRKLK ALLDASAADL IRQYRLEKAT TLLRSGMDIA SVSYNVGFGS
PSYFTQCFRE RYHLTPSDFI SGGI
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