Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1752 |
Symbol | |
ID | 8225323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2139720 |
End bp | 2142221 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644929606 |
Product | hypothetical protein |
Protein accession | YP_003086158 |
Protein GI | 255035537 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.187912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATAA TCAATGCAAT AGCAACAGCG CTGCTCCTGA ATGCGCTTTC AACCGACGTG ATTGCGCAGA AAGGCCAGGA CCTGAAACTA TGGTATAGCA AACCCGCCTC GCGCTGGGTA GAGGCGCTGC CGGTGGGTAA CGGGCATATC GGCGCCATGG TGTTCGGCGG TGTGGAAGAG GAACTGATGC AGCTCAATGA GAGCACATTG TGGTCGGGCG GGCCGGTGAA GACGAACGTG AACCCTGCCT CGGCCTCCTA CCTGCCGCAG GTGCGGAAAG CATTGCTGGA AGAGCAGGAC TACCAGAAAG CCAACGAGTT GCTCAAAAAA ATGCAGGGCC TTTACACGGA ATCCTACATG CCCATGGCCG ACCTGAAGAT CGTCCATGAC CTGAAAGGAC AGCCGGCCTC GGCCTACTAC CGCGACCTCG ATATCGCGCA CTCCAAAGCG ACAACCCGTT TTTCCGCCGG GGGTGTTGAC TATAAACGGG AAGTGTTCAC TTCGGCACCG GATAATATTA TGGTGATCAA AGTGTCCGCT TCAAAACCCA ATGCGCTCAA TTTCACTGTT TCGCTCAGCA GCCAGCTGCG CTACCGGCTC GAAGCTTCGG GTAACAAGGA GCTGCTCGTG AACGGCAAGG CCCCATCGCA CGTGGCACCG AACTATTATA ATCCGCCGGG CCAGGAGCCA ATCATTTACG ACGATCCGAA TGGCTGCAAC GGCACCCGTT TCCAGATCCG CACCAAAGCC GTGAGCAGAG GAGGCACAAC GGTCGTCGAC ACAGCCGGTA TCCATGTTAA AAATGCTACG GAAGTGGTGA TTTTCCTTTC CGCGGCCACA AGTTTCAACG GCTTCGACAA ATGCCCCGAC AAAGATGGCA AGGATGAAAA AGCATTGGCG AAAAACTACC TCGACAAGGC CCTGGCCAAA GGGTACGCCA CGCTGGCTAC CAGCCACCAG CACGACTATC ACAGCTATTT CAACCGCGTA AGTTTCTCGG TAACAGACAC GCTCACACGC AACCCGAACA CTGCATTGCC TTCGGACGAG CGCCTGATGG CCTATGCCAA AGGCGATTAC GACCCGGGGC TGGAAACATT GTACTACCAG TTTGGCCGGT ATCTGCTCAT TTCTTCTTCA CGCGCCGCAT TGCCGGGCGT GCCCGCCGGA CCACCTGCCA ATTTGCAGGG CATTTGGAAC AAAGAAATGC GCCCGCCGTG GAGCTCCAAC TACACCATCA ATATCAACAC GCAAATGAAC TATTGGCCTG CGGAAGTGGC TAACCTGTCG GAAATGCACC GGCCGCTGCT TTCGTGGATC AAAGACCTCT CGCAAACCGG CGCGGTAACG GCCAAAGAAT TTTACGATGC CAAAGGCTGG GTGGCGCACC ATAATGCCGA TATATGGGGA ATGTCCAATC CGGTGGGAAA TGTGGGCGAT GGCGACCCGG TGTGGGCCAA CTGGTACATG GGTGCCAACT GGCTCTGCCA GCATTTGTGG GAGCATTACC GGTTTTCGGG CGATAAGGCA TTTCTGCGGG ACAAAGGCTA CCCGCTCATG AAAGAAGCCG CGCTGTTTAC GCTCGACTGG CTCGTGGAAG ACAAGGATGG CTACCTGGTT ACGGCGCCGT CCACCTCGCC GGAAAACAAG TTCAAAGACC CGAAAGGCGG AGAAGCCGCC GTATCGGTGG CCACTACGAT GGATATTTCG ATCATCCACG ACCTGTTTTC CAACCTGATA GACGCCGCCG AAGTGCTTGG TACCGACGAG GATTTCCGGA AACTGCTCAT TGAAAAGCGG GCCAAGCTCT ATCCGCTGAA AATAGACGGG CGGGGAAGGT TGCAGGAATG GTACAAAGAC TTTGAAGAAA CCGACACACT CCACCGGCAC GTATCGCATT TGTTCGCGCT GCATCCGGGG CGCCGCATTT CGCCGGAAAC GCCCGAGTTT TTCCAGGCTG CGAAAAAAAC GCTGGAAGTC CGGGGCGATC ACGGCACGGG TTGGAGCAAG GGCTGGAAGA TCAATTTCTG GGCGAGGCTG CTCGACGGCG ACCACGCTTA CCTGCTCATC CGCCAGCTGA TGAAATATAC CAATGAAGGA AATAGCGAAT ACCGCGGCGG AGGCACCTAT CCCAACTTTT TCGACGCCCA CCCACCCTTC CAGATCGACG GGAATTTCGC GGGCACAGCC GGCATGTCGG AAATGCTGAT CCAGAGCCAT TTAAACGAAG TATACCTGCT GCCAGCATTG CCGAATGCCT GGAAACACGG ACAGGTTAAA GGCCTGAGAG CGAGAGGTGG TTTTGAGGTT ACGATGAACT GGAAAAATGG AAAGCTGGCC AATGCCAGTG TGAAATCCGA GAATGGGAAC AATTGTACGA TCAAAACGAG GGGGCCGGTA AAGATATCGG GCGCCAAATC CGTCGAAAAG CGGACCGAGT CGGGTTACAT CAATCAATTT CCTACTACCA AAGGCGGGAC GTACCAGATT CAGGCGCAAT AG
|
Protein sequence | MKIINAIATA LLLNALSTDV IAQKGQDLKL WYSKPASRWV EALPVGNGHI GAMVFGGVEE ELMQLNESTL WSGGPVKTNV NPASASYLPQ VRKALLEEQD YQKANELLKK MQGLYTESYM PMADLKIVHD LKGQPASAYY RDLDIAHSKA TTRFSAGGVD YKREVFTSAP DNIMVIKVSA SKPNALNFTV SLSSQLRYRL EASGNKELLV NGKAPSHVAP NYYNPPGQEP IIYDDPNGCN GTRFQIRTKA VSRGGTTVVD TAGIHVKNAT EVVIFLSAAT SFNGFDKCPD KDGKDEKALA KNYLDKALAK GYATLATSHQ HDYHSYFNRV SFSVTDTLTR NPNTALPSDE RLMAYAKGDY DPGLETLYYQ FGRYLLISSS RAALPGVPAG PPANLQGIWN KEMRPPWSSN YTININTQMN YWPAEVANLS EMHRPLLSWI KDLSQTGAVT AKEFYDAKGW VAHHNADIWG MSNPVGNVGD GDPVWANWYM GANWLCQHLW EHYRFSGDKA FLRDKGYPLM KEAALFTLDW LVEDKDGYLV TAPSTSPENK FKDPKGGEAA VSVATTMDIS IIHDLFSNLI DAAEVLGTDE DFRKLLIEKR AKLYPLKIDG RGRLQEWYKD FEETDTLHRH VSHLFALHPG RRISPETPEF FQAAKKTLEV RGDHGTGWSK GWKINFWARL LDGDHAYLLI RQLMKYTNEG NSEYRGGGTY PNFFDAHPPF QIDGNFAGTA GMSEMLIQSH LNEVYLLPAL PNAWKHGQVK GLRARGGFEV TMNWKNGKLA NASVKSENGN NCTIKTRGPV KISGAKSVEK RTESGYINQF PTTKGGTYQI QAQ
|
| |