Gene Dfer_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1752 
Symbol 
ID8225323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2139720 
End bp2142221 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content55% 
IMG OID644929606 
Producthypothetical protein 
Protein accessionYP_003086158 
Protein GI255035537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.187912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA TCAATGCAAT AGCAACAGCG CTGCTCCTGA ATGCGCTTTC AACCGACGTG 
ATTGCGCAGA AAGGCCAGGA CCTGAAACTA TGGTATAGCA AACCCGCCTC GCGCTGGGTA
GAGGCGCTGC CGGTGGGTAA CGGGCATATC GGCGCCATGG TGTTCGGCGG TGTGGAAGAG
GAACTGATGC AGCTCAATGA GAGCACATTG TGGTCGGGCG GGCCGGTGAA GACGAACGTG
AACCCTGCCT CGGCCTCCTA CCTGCCGCAG GTGCGGAAAG CATTGCTGGA AGAGCAGGAC
TACCAGAAAG CCAACGAGTT GCTCAAAAAA ATGCAGGGCC TTTACACGGA ATCCTACATG
CCCATGGCCG ACCTGAAGAT CGTCCATGAC CTGAAAGGAC AGCCGGCCTC GGCCTACTAC
CGCGACCTCG ATATCGCGCA CTCCAAAGCG ACAACCCGTT TTTCCGCCGG GGGTGTTGAC
TATAAACGGG AAGTGTTCAC TTCGGCACCG GATAATATTA TGGTGATCAA AGTGTCCGCT
TCAAAACCCA ATGCGCTCAA TTTCACTGTT TCGCTCAGCA GCCAGCTGCG CTACCGGCTC
GAAGCTTCGG GTAACAAGGA GCTGCTCGTG AACGGCAAGG CCCCATCGCA CGTGGCACCG
AACTATTATA ATCCGCCGGG CCAGGAGCCA ATCATTTACG ACGATCCGAA TGGCTGCAAC
GGCACCCGTT TCCAGATCCG CACCAAAGCC GTGAGCAGAG GAGGCACAAC GGTCGTCGAC
ACAGCCGGTA TCCATGTTAA AAATGCTACG GAAGTGGTGA TTTTCCTTTC CGCGGCCACA
AGTTTCAACG GCTTCGACAA ATGCCCCGAC AAAGATGGCA AGGATGAAAA AGCATTGGCG
AAAAACTACC TCGACAAGGC CCTGGCCAAA GGGTACGCCA CGCTGGCTAC CAGCCACCAG
CACGACTATC ACAGCTATTT CAACCGCGTA AGTTTCTCGG TAACAGACAC GCTCACACGC
AACCCGAACA CTGCATTGCC TTCGGACGAG CGCCTGATGG CCTATGCCAA AGGCGATTAC
GACCCGGGGC TGGAAACATT GTACTACCAG TTTGGCCGGT ATCTGCTCAT TTCTTCTTCA
CGCGCCGCAT TGCCGGGCGT GCCCGCCGGA CCACCTGCCA ATTTGCAGGG CATTTGGAAC
AAAGAAATGC GCCCGCCGTG GAGCTCCAAC TACACCATCA ATATCAACAC GCAAATGAAC
TATTGGCCTG CGGAAGTGGC TAACCTGTCG GAAATGCACC GGCCGCTGCT TTCGTGGATC
AAAGACCTCT CGCAAACCGG CGCGGTAACG GCCAAAGAAT TTTACGATGC CAAAGGCTGG
GTGGCGCACC ATAATGCCGA TATATGGGGA ATGTCCAATC CGGTGGGAAA TGTGGGCGAT
GGCGACCCGG TGTGGGCCAA CTGGTACATG GGTGCCAACT GGCTCTGCCA GCATTTGTGG
GAGCATTACC GGTTTTCGGG CGATAAGGCA TTTCTGCGGG ACAAAGGCTA CCCGCTCATG
AAAGAAGCCG CGCTGTTTAC GCTCGACTGG CTCGTGGAAG ACAAGGATGG CTACCTGGTT
ACGGCGCCGT CCACCTCGCC GGAAAACAAG TTCAAAGACC CGAAAGGCGG AGAAGCCGCC
GTATCGGTGG CCACTACGAT GGATATTTCG ATCATCCACG ACCTGTTTTC CAACCTGATA
GACGCCGCCG AAGTGCTTGG TACCGACGAG GATTTCCGGA AACTGCTCAT TGAAAAGCGG
GCCAAGCTCT ATCCGCTGAA AATAGACGGG CGGGGAAGGT TGCAGGAATG GTACAAAGAC
TTTGAAGAAA CCGACACACT CCACCGGCAC GTATCGCATT TGTTCGCGCT GCATCCGGGG
CGCCGCATTT CGCCGGAAAC GCCCGAGTTT TTCCAGGCTG CGAAAAAAAC GCTGGAAGTC
CGGGGCGATC ACGGCACGGG TTGGAGCAAG GGCTGGAAGA TCAATTTCTG GGCGAGGCTG
CTCGACGGCG ACCACGCTTA CCTGCTCATC CGCCAGCTGA TGAAATATAC CAATGAAGGA
AATAGCGAAT ACCGCGGCGG AGGCACCTAT CCCAACTTTT TCGACGCCCA CCCACCCTTC
CAGATCGACG GGAATTTCGC GGGCACAGCC GGCATGTCGG AAATGCTGAT CCAGAGCCAT
TTAAACGAAG TATACCTGCT GCCAGCATTG CCGAATGCCT GGAAACACGG ACAGGTTAAA
GGCCTGAGAG CGAGAGGTGG TTTTGAGGTT ACGATGAACT GGAAAAATGG AAAGCTGGCC
AATGCCAGTG TGAAATCCGA GAATGGGAAC AATTGTACGA TCAAAACGAG GGGGCCGGTA
AAGATATCGG GCGCCAAATC CGTCGAAAAG CGGACCGAGT CGGGTTACAT CAATCAATTT
CCTACTACCA AAGGCGGGAC GTACCAGATT CAGGCGCAAT AG
 
Protein sequence
MKIINAIATA LLLNALSTDV IAQKGQDLKL WYSKPASRWV EALPVGNGHI GAMVFGGVEE 
ELMQLNESTL WSGGPVKTNV NPASASYLPQ VRKALLEEQD YQKANELLKK MQGLYTESYM
PMADLKIVHD LKGQPASAYY RDLDIAHSKA TTRFSAGGVD YKREVFTSAP DNIMVIKVSA
SKPNALNFTV SLSSQLRYRL EASGNKELLV NGKAPSHVAP NYYNPPGQEP IIYDDPNGCN
GTRFQIRTKA VSRGGTTVVD TAGIHVKNAT EVVIFLSAAT SFNGFDKCPD KDGKDEKALA
KNYLDKALAK GYATLATSHQ HDYHSYFNRV SFSVTDTLTR NPNTALPSDE RLMAYAKGDY
DPGLETLYYQ FGRYLLISSS RAALPGVPAG PPANLQGIWN KEMRPPWSSN YTININTQMN
YWPAEVANLS EMHRPLLSWI KDLSQTGAVT AKEFYDAKGW VAHHNADIWG MSNPVGNVGD
GDPVWANWYM GANWLCQHLW EHYRFSGDKA FLRDKGYPLM KEAALFTLDW LVEDKDGYLV
TAPSTSPENK FKDPKGGEAA VSVATTMDIS IIHDLFSNLI DAAEVLGTDE DFRKLLIEKR
AKLYPLKIDG RGRLQEWYKD FEETDTLHRH VSHLFALHPG RRISPETPEF FQAAKKTLEV
RGDHGTGWSK GWKINFWARL LDGDHAYLLI RQLMKYTNEG NSEYRGGGTY PNFFDAHPPF
QIDGNFAGTA GMSEMLIQSH LNEVYLLPAL PNAWKHGQVK GLRARGGFEV TMNWKNGKLA
NASVKSENGN NCTIKTRGPV KISGAKSVEK RTESGYINQF PTTKGGTYQI QAQ