| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1748 |
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| Symbol | |
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| ID | 8225319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2135889 |
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| End bp | 2137541 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929602 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003086154 |
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| Protein GI | 255035533 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA TTGTTCCGGC TAAGGAATCG GGCCTAGATT CAAATGATAA GCTTCAACTT
CAAAGCATGG TGGAGAGTGC CCCTTTTCCC ATTGGCGTGT ATGTGGGGCG CGAAATGCGC
ATTGCGCTTG TTAATCAATC CATCATCGAC GTTTGGGGAA AAGGTCCGGA AGTAGTGGGT
AAAACGTACG CCGAAGTGTT GCCCGAGCTC GCGGGAACCG GCATTTACGA ACAAATCCAA
AAAGTATACA CCACCGGCGA GCCCCACCAC GCCAATAACC AGCGCGTAGA CCTGGTTGTC
GACGGCATTT TGCAGGAGTT TTATTTCAAA TACAGCTTTA CCCCGCTTTT CGACGCGCAG
GGAGAGGTGT ATGGTGTAAT GAACACCGCT GCCGACGTGA CTGACCTGGT GCTGGCCCGC
CAGCAGCTCG AATTGGCCCA GACAAGCCTG AAAGGTGCCA TTGACCTCGC CCAGCTCGGC
ACCTGGGAGC TCGACCTGAC TACACGAGCG GTGAGTTATT CGGAAAACAT TCAATCCTGG
TTTGGTTTCG CAAAAGAACG GATCGCGATC GACGACGTAT ACGACCCGAT GCACCCCGAA
GACCGCGACC CCGTAGAGGC GGCGATCAAC CGGGCGATCG CGCCGGGCTC TTCCGGGATT
TTCGATGCGG AGTACCGCCT GGTTCATCCC GATACACGTT CGGAGCGGGT GGTGCATGCG
CGGGGGATTG TGGTATCGAA TGCCGAGGGC AAGCCCTATA AATTGCTGGG AACGGCCCAG
GATGTGACCG CCGAGCGCCA CAGGCAGCAG GATCTGGAGC GGCTCGTGCA GGAGCGGACC
ACAGAGCTGG AAGCCCTCAA CGAAGAACTT GCCGCACAAA ATGAGGAATA TATGGTTGTA
AATGAAGAGC TCGAAGAAGC CAACCGCCTT CTGTTGCGCT CGAATGAAAA CCTCGAACAA
TTTGCGTACG CAGCCGGCCA CGATTTGCAG GAGCCGCTGC GCAAAATACG GCAGTTCAGC
GCGTTACTGA CATCCCATAT ACCCGGCGCG GCCGGAAACG ACGCCAGGTA CATTGAGCGG
ATCAATGCCG CAGCGGGAAG AATGTCCACA TTGATCAACG ACCTGCTGGA ATTTTCCAAC
ATCACAACCG GCCAGGCGCG CATCGAGCCG GTGGAATTGA ATGCGGTGAT CGACACCATA
CTGCTCGACC TGGACCTCAT TATCGCCGAA ACCAATGCGC ATGTGCAAGT TGAGCGGCTC
CCCGTGATCG AAGGCAATGC ATTGCAGCTG GGTCAGCTTT TCAGGAACCT GCTGGCAAAT
GCATTGAAAT TCCGTCGGCC CGGGCACGCG CCGGTGGTGC TCGTCACTTA CGACCAGGTA
CCCCGAACGC TGCTTCCCGC CGCCGCGAAC CCGGTCCGCA AATCGGAGGT CTATCACCTG
ATCCAGGTGC AGGACAATGG GATAGGGTTT GACGAACAAT ATCTGGACCG CATATTTCAG
GTGTTCCAGC GGCTTCACGG GCGGAGCGAA TATGAAGGGA CAGGCATCGG ATTGGCGATT
TGCGAAAAGG TGGTGACGCA TCATGGCGGC GCGCTCACGG CAAGCAGTCA ACTCGGGCAC
GGAGCCACGT TCAAGATTTT TTTACCAATG TAG
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| Protein sequence | MSGIVPAKES GLDSNDKLQL QSMVESAPFP IGVYVGREMR IALVNQSIID VWGKGPEVVG
KTYAEVLPEL AGTGIYEQIQ KVYTTGEPHH ANNQRVDLVV DGILQEFYFK YSFTPLFDAQ
GEVYGVMNTA ADVTDLVLAR QQLELAQTSL KGAIDLAQLG TWELDLTTRA VSYSENIQSW
FGFAKERIAI DDVYDPMHPE DRDPVEAAIN RAIAPGSSGI FDAEYRLVHP DTRSERVVHA
RGIVVSNAEG KPYKLLGTAQ DVTAERHRQQ DLERLVQERT TELEALNEEL AAQNEEYMVV
NEELEEANRL LLRSNENLEQ FAYAAGHDLQ EPLRKIRQFS ALLTSHIPGA AGNDARYIER
INAAAGRMST LINDLLEFSN ITTGQARIEP VELNAVIDTI LLDLDLIIAE TNAHVQVERL
PVIEGNALQL GQLFRNLLAN ALKFRRPGHA PVVLVTYDQV PRTLLPAAAN PVRKSEVYHL
IQVQDNGIGF DEQYLDRIFQ VFQRLHGRSE YEGTGIGLAI CEKVVTHHGG ALTASSQLGH
GATFKIFLPM
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