| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1712 |
|---|
| Symbol | |
|---|
| ID | 8225283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2086767 |
|---|
| End bp | 2088677 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929566 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003086118 |
|---|
| Protein GI | 255035497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.841905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT TTACCAAACT CCTCGCTTGT TTGCTTGCAT TCACTGCATG GAACAACGCT
TCCCACGCCG CCGATCCGTG GCGCCTGCGT GCATTGCCCG CGTCCGTACG CCTCGACCCC
GTTTCGAATG AAATTATCGA ACACCGTTTC AAAGGCGTGC CCGCTAAGCA AACGGGCAAT
CTGCTGGATA AGAACTGGAT TTATGACGGA AAGCAAGTTT CGCTGCACGG CGCGCGCGGG
GAATATGTGT CCTTTCAATT GGTATTGACC AACGAATCGG ACGCGGAACT GACGGGCATT
AAAATCGATA TGACGCCATT CAAAAATGGA AGTGCGGAGC TTACGGCGAA GCCGGAGCTT
TTCCTGGAAT GGTCTGTGAA TGTGCAAAGT ACGAGCACCG GCTACCCGCG CGCCACCCTC
GGAAAAGGCT GGTATCCCGA TGCGCTGATC CCGTTCAAAT ACATTCAGAC CGATTCGGCC
AAAGTCCGCG GGCGCTGGGT GTACCCGTTT ACACTGCCGG ATTTTAACAA CCGCATCGCA
AACCAGCGTT CGCAGGTGAT TTGGGTGGAC CAATTCATTC CGGCGGGTGC AACACCTGCG
CAGCCAGGTA CTTACCAGAG CATCATGACA GTCACTATCG GAGGGCAAAA AAGGCAAATG
CCGGTGAGCC TGACCGTCTG GGACTTTGAA CTGCCGAACG AAAACCTGTT CAAAGCCAGC
CTGCAACACG AGGGTTTCCT CAGCCGAATG GACGAAAAGC AGGAACTCGC TGTGTACCAG
CTCTTCAAGC GCAACCGCAT TTCACTTATG GACCCGACTT ACGACCCGGA AATCCAGGTC
AAAAACGGAA AGGTGGACAT CCAATGGGAA AAGTTTGACA AACGACTGAA AAAATACCTC
ACCGGCGCGG CATTCACCGA GGCGCACGGC TACCAAAACG GCCCCGGCTA CGGCGAGCCG
CTCGAAACTT TCGCGCTGCC GTTCGACGTG TACGGCAAGC ATGGCACCGC CGGCTGGCCC
GATATCGGCA AGCCGGAAGT GGAGCGCAAT GCGGCCAACC AGGCTATTTA CACGAGCGCC
ATCCGGCAGG TGCGCCAGCA TTTGCTACCG ATGGTGAACC CCAAAAAGAC GCTGCTGACG
GTATACCTGA ACGGCCTGGA CGAGTCGTAT TTCCCCGAAG CATGGTCGCG GATGGTGTTT
TATGGGAATT TGTTCAAAAA GGAATATCCA GAAGCAAAAT TCCGGGTGGA TGGTGCGTAC
ACCAAGCAAG CTATGGACGT GATTGGCAAG TCCATTACCG ACTGGGCCTC GCACACGATC
AACTACAACA TCGACTCCGT AAAGCATTAC CAGCAAATGG GCATCAAAGA CTGGCTCTAC
GGCCCGATGC TCTACGAAGC GAAGCTGAAC AGCTGGGTCG GCAGCTCTAC GTTCATTGAT
TTACCATTAA TCAGCGACCG GGCGATCAGC TGGTCGTGCT GGAAATACAA AACCTACTCC
TGGATCAGCT GGGGCGTGGG CGCAGGCTGG GAACGTGGCT GGTACGATCC CGAATCCTGG
AAGGATTTCT ACAAGGAAGC CTCGGAGGCC GATGCGGAAT TTACCTACCG GACATTCAAT
GGCAACGGCT CGGTGATTTA CAAACCCGGC ATGGTGCCGA ACGTATCCGA ACCTTGCCCG
TCTATCCGCC TGAAAACCAT GCGCGATGGC GTGCAGGAAT ACGAATACCT GCGCCTGCTC
ACTAAGCTCG ACGGTAACCC GAAGCGCGCC GATGCATTGG TGGACCAGCT CATTAAGGAG
CCGTTTGGCG ATAAATCCAT CGGTAACCTC GATGTATGGA GCTACGACCA GGAGCAATGG
TACAAAGTCC GCATGGAGCT GGGCGAGCTG ATTTCCAAGA GCAAAAAGTA A
|
|---|
| Protein sequence | MMKFTKLLAC LLAFTAWNNA SHAADPWRLR ALPASVRLDP VSNEIIEHRF KGVPAKQTGN
LLDKNWIYDG KQVSLHGARG EYVSFQLVLT NESDAELTGI KIDMTPFKNG SAELTAKPEL
FLEWSVNVQS TSTGYPRATL GKGWYPDALI PFKYIQTDSA KVRGRWVYPF TLPDFNNRIA
NQRSQVIWVD QFIPAGATPA QPGTYQSIMT VTIGGQKRQM PVSLTVWDFE LPNENLFKAS
LQHEGFLSRM DEKQELAVYQ LFKRNRISLM DPTYDPEIQV KNGKVDIQWE KFDKRLKKYL
TGAAFTEAHG YQNGPGYGEP LETFALPFDV YGKHGTAGWP DIGKPEVERN AANQAIYTSA
IRQVRQHLLP MVNPKKTLLT VYLNGLDESY FPEAWSRMVF YGNLFKKEYP EAKFRVDGAY
TKQAMDVIGK SITDWASHTI NYNIDSVKHY QQMGIKDWLY GPMLYEAKLN SWVGSSTFID
LPLISDRAIS WSCWKYKTYS WISWGVGAGW ERGWYDPESW KDFYKEASEA DAEFTYRTFN
GNGSVIYKPG MVPNVSEPCP SIRLKTMRDG VQEYEYLRLL TKLDGNPKRA DALVDQLIKE
PFGDKSIGNL DVWSYDQEQW YKVRMELGEL ISKSKK
|
|---|
| |