Gene Dfer_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1709 
Symbol 
ID8225280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2083345 
End bp2084229 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content57% 
IMG OID644929563 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003086115 
Protein GI255035494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.726905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA GTACAAACAG TTGGTTGATT TTTGTGATTA TTCATGTCCT GTTTATCGGA 
GTATGGGGCG CTGTGATTGA AATGCCGGAA AAGGCAGGTT TTCCCGCCAC GCTGGGCTAT
GTGGTGTGGG CACTCACGAT GGTACCCGCT TCGCTGGCGG CATTGAAACT GAAAGGCTGG
AAACTGGATT TCAACCGGAA GGCAATGCTT TGGGGCGGCC TGGCGGGGCT GTTGGGCGCC
GGCGGGCAGC TGGTGCTTTT CTTTGTGCTG CGTATTGCGC CGGCCTACCT GGTGTTTCCG
CTGCTTTCGC TCACGCCCGT GGTTACCATC CTGATGGCCG TGCTGCTGCT GCATGAAAAA
ACCGGCAAAA TGGGCTGGGC AGGCGTTGTA CTGGCACTGG TTTCGATTTT CATGCTCTCC
TACCAGCCCG CCGGCGCGAC GCTCGTGAGC GGGTACACCT GGATGCTGCT GACGGCCATT
CCGCTGCTGG CCTGGGGCGC GCAGGGCTAC GTGATGCGGT TTGCGAACGA GATCATGTCG
GCCGAAAGCC TGTATTTCTA CATGATGTCG ACCTCGGTAA TGCTCATCCC CCTCGCGCTG
ATGATGACGG ATTTCAGTCA ACCGATCCAG TGGGGGTTCA AAGGGCCCTA TTTGTCGGCG
ATCATCCAGT CGCTCAATGC GTTCGGTGCG CTGTGCCTCG TGTATGCATT CCGGTACGGG
AAAGCGATCA TCATCGCGCC CATTACCACA GCCCTTTCAC CGGTCCTTAC AGTGGCATTA
TCGCTGGCAT TGTACCAAAC CATCCCCCAT CCTGTAATCG TCGCCGGCAT TGCGCTTGCT
ATTGTTTCGG CATTGCTGAT GGGATTTGAA GAGGTGCACA GCTGA
 
Protein sequence
MSRSTNSWLI FVIIHVLFIG VWGAVIEMPE KAGFPATLGY VVWALTMVPA SLAALKLKGW 
KLDFNRKAML WGGLAGLLGA GGQLVLFFVL RIAPAYLVFP LLSLTPVVTI LMAVLLLHEK
TGKMGWAGVV LALVSIFMLS YQPAGATLVS GYTWMLLTAI PLLAWGAQGY VMRFANEIMS
AESLYFYMMS TSVMLIPLAL MMTDFSQPIQ WGFKGPYLSA IIQSLNAFGA LCLVYAFRYG
KAIIIAPITT ALSPVLTVAL SLALYQTIPH PVIVAGIALA IVSALLMGFE EVHS