| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1702 |
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| Symbol | |
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| ID | 8225273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2072550 |
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| End bp | 2076080 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929556 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086108 |
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| Protein GI | 255035487 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.456283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.767755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAA CCATACACCA GTTTTTGCTG ACCGTCCTGT TTGCCGGCGT GACCCTCGCC
CGGACCGCCG GTGCACAGGA TGCGCTCAAC CAGAAAATCA GCATTCAGGC AGAGAATGAG
GGGCTTCGCA CTGTGCTTAA CCAGATTCAG AAGCTGGCGG ACGTGCATTT TACTTACAAC
TCCGCCCTCA TTACGGCCCA ACAAAAAGTG AGCGTAACGG CGCATCAGCA GCCGCTGGCA
GGCGTGCTGG ACGAGCTGCT GATCAAATCG GGCATCCGGT ACCGGCTGCA AGGGAGGCAG
ATTATCCTGC AAAAAGCCTT ACCTCCCTCG AAAAGCGACC CTCAGCCCGA GCTTCCTAAC
GGCGCGAGCT CGCAGGCAGA CAGGAAAATC CGGGGCGTGG TGAAAGATGC GGCAGGCGAG
GCGCTCCCGG GTGTGAGTGT TATGCTGAAA GGCTCCCAGC GGGGAACGCT TACCAACGTC
GACGGGGCTT TTGAGCTGGA TGTGCCGGAA GAAAACGGGA CGCTGATCCT GTCCTATGTA
GGGTATATGA CAAAGGAAAT AGCCGTAGGC GGCCAGACCA GCTTCGATGT CGTGCTGGAA
GCGGACGTCA AAATGCTGGA CGCGGTGGTG GTGACGGCGC TGGGTTTCAA GGAATCGGCC
GACAAGCTGG GATCGACCAG TTCGAAAATT ACCGATAAGA GCATTGCGGC ATCCGGCGAA
ACCAGCCTGC TCAACAAAAT GGCTGGCAAA GCGTCGGGCG TGTTCATCGG ACGGTCGTCG
GGAAGTGATC CGGGCGGCGG CTCGTTTGTG CAGATCCGCG GCGCGAGCAC ATTGTCGGGC
TCATCGCAGC CGCTGTATAT TGTGGATGGG GTGCCGATCA ACAGCTCCGT GCACGGCGGT
ACGAACATCC GCGGCGTAGT GCAGCAATCG CGGGTGAACG ACATTAATCC GGACGATATC
GCGTCCATCC AGGTGCTCAA AGGCGCTTCG GCGGCTGCGC TCTGGGGATC GCGGGCGGCC
AACGGTGTGA TCGTGATCAC GACGAAAAGC GGTTCTTTCA ACGACCGGAT GCGGATTTCG
TTTAAATCCA GCTATTCAAT GGATGAGATC AACCGCTTCC ATCAGCGGCA AACCGCATTC
GGGCAGGGCG ATCAGGGAAA ATTCAATCCC GCATCGGGCA ATGCCTGGGG GGATAAAATC
GCTGCGAGAG CGGGCGGTGC GGACGAAGTG AACATGTCGG GAGAGTTTTT CGAAGGTTAC
CAAACCGGTA CCCGCTATTA TCCCATCACC AAAAAGAATT CCCGCGACGT ATTTGCCGAT
AATCAGTATG ACGCGATTTT CAGGAACGGC TATTCGATGG ACAACAGCCT GAGCCTGAGC
GGCGGCGGTG CCAGTTCCAA CTATATGTTC AGCCTCAGCG ACGTTTACCA GAAGGGCGTT
TTCAGACATA ACAGCGACTA CCGGCGAAGC ACCATCCGCC TGAATATCGA AAGCAAGCTG
AATGACATTA TTAAACTTTC GACCCACGCT TCCTATGCGA TGATCCGCTC GGAGCGCGTA
CAGCGATCGA ACAACACGGC GGGGATGCTG CTGGGCTATT ACCGGATGAC GCCCGATTTT
GACATCACGG ATTATAAGGG TAACTACTAT GCCGGCCCCA ATGCCGCGCC GGTCGTAAAC
CGCCAGCGTT CTTACCGCAA CTACCTCGGA AACAGTTCCA ACCCGGTGTA TAACAACCCG
TTGTGGACGA TGATCGAGCA GAAAAACCCG AACTCCGTCA ACCGGTTTAT CGGTAGCGCC
GAGCTGACCA TTACGCCGCT GAAAGGATTT GACATTATCA ACAGGGTAGG GATCGATAAT
TCTTCGGACG TAAGACAAAC CTATTTCCCC GTCAACTCCG CCCAGGCTGA TGCCGTGAAC
CTGAATGGCC GCTACGGTGA AGTGAATATC CTGGAAAACC AGCTGAACTA CGACCTCATC
GGACGTTATT CCCACAATTT CAACCCCAAT TTCTCGGCCA ACCTCATCGC CGGATTCAAC
CTGAACGACC GCAAATATTC CGACCTGGGC GGCGAAATGT CCGATTTCCT CATCGCCGAC
GGCCCCTGGA ATTTTTCCAA TGCATTGACG CTCAATAAAA ATCCGAACAA TGGTAAAACT
TACATCCGCA GCGCAAGGGC GTATTCGGTA CTAGGTTTGT CGTTTTATGA TGCATTGTTT
TTGAATTTGT CGTTTGCCGG CGAAGCCGCA TCTACTTTCG GGGAAGCTTC CGACAATACG
TTTTTCTATC CTTCCGGCGA CGTGGCCTGG CAATTTACGA AGCTGAAATT CTTCGAGCGT
GCCAACTGGC TGTCATTCGG GAAGTTGCGG GCTTCCTACG GCGTGGTGGG TTCACAGCCT
GCGCCTTACC GCACCAGGAC GCTCTTCGTG CCGGGTAACT CGCTTTACGG AAACGGTTCA
TACCTGCAAA GCGCCAACTT TGGAAACGAC CAGCTGCGCC CTGAAAGAAA AACGGAATAC
GAAGTCGGCG CCGATCTCCG GTTTTTGGGT AACCGGCTGC GCACCGAAAT CACCTATTAT
AAAAACAGGA CGAAAGACCT CCTGCTGTCC GTGCCCGTAC CGAATTCGAC AGGCTTTTCA
AGTGCCTACC AGAATGCCGG CACTATGCAG AACAAGGGTA TCGACTTTGA TTTGAACTAC
GACATTTTCA AACGTAAGGA CCTGACCCTT TCCCTGAATT TTAACTTAAA CAGAAACCGC
AGCCTGGTAA CAGACCTCGC CGGCGCCACA GCCGTGCAGG TGGGCGGGAT CAGCGGCTAC
ATGACGATCA ATGCGCTCGA AGGACAGCCG GTGGGCGTGT TTATGGGCGG CCATTATGCC
CGCGACGACC AGGGTAACAA GATTTTCGAC GCCAACGGAT TCCCGACGGT GAATGCGGCC
AATGCCAAAA TCGGCGATCC TAACCCGAAT TGGAGAGGTG GTTTCGGGGC AAATCTTTCG
TACAAATCGT TCTCGCTCGG CTTGCTGTTT GAAACCTTCC AGGGCGGCGA CTTTTTCGAG
GGAACGCGCG GCGTAATGTA CTCGCACGGT ACGCACGAGG ACGTAGGCAA AGAGGTGACG
CTGACGCGCG ACCTGAAAAA CTTCAGAGGC AATGTGATAC CGGCCGGAAC GACGGTGCGG
GGCAATATCG CCGACCTTGG AGCGGGTGAG GTGCTGCTGG ACGAATCGTA TTACACGACG
TTGGGAGGCG GTTTCAGCGG TTTGAAAGAG CAATTCGTTG TGGACGGCAG CTGGACCAGG
CTGCGGGAGC TTTCATTGGG CTATACCCTG CAATCCGAAG CTTTCCGCAA AGCGAGCAAG
CTGCAATCCA TCGAGTTCAG GCTGTCGGGC CGGAACCTGT TTTTGTGGAC GGGCGTGCGC
GGTGTAGACC CCGATTCCAA CCACACGCAG GTATCGCTCG GCCGGGGACT GGATTATTTC
GATAACCCGG GTACAAGATC CTACCTGTTC TCCTTACTCA TTAACTATTA A
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| Protein sequence | MRITIHQFLL TVLFAGVTLA RTAGAQDALN QKISIQAENE GLRTVLNQIQ KLADVHFTYN
SALITAQQKV SVTAHQQPLA GVLDELLIKS GIRYRLQGRQ IILQKALPPS KSDPQPELPN
GASSQADRKI RGVVKDAAGE ALPGVSVMLK GSQRGTLTNV DGAFELDVPE ENGTLILSYV
GYMTKEIAVG GQTSFDVVLE ADVKMLDAVV VTALGFKESA DKLGSTSSKI TDKSIAASGE
TSLLNKMAGK ASGVFIGRSS GSDPGGGSFV QIRGASTLSG SSQPLYIVDG VPINSSVHGG
TNIRGVVQQS RVNDINPDDI ASIQVLKGAS AAALWGSRAA NGVIVITTKS GSFNDRMRIS
FKSSYSMDEI NRFHQRQTAF GQGDQGKFNP ASGNAWGDKI AARAGGADEV NMSGEFFEGY
QTGTRYYPIT KKNSRDVFAD NQYDAIFRNG YSMDNSLSLS GGGASSNYMF SLSDVYQKGV
FRHNSDYRRS TIRLNIESKL NDIIKLSTHA SYAMIRSERV QRSNNTAGML LGYYRMTPDF
DITDYKGNYY AGPNAAPVVN RQRSYRNYLG NSSNPVYNNP LWTMIEQKNP NSVNRFIGSA
ELTITPLKGF DIINRVGIDN SSDVRQTYFP VNSAQADAVN LNGRYGEVNI LENQLNYDLI
GRYSHNFNPN FSANLIAGFN LNDRKYSDLG GEMSDFLIAD GPWNFSNALT LNKNPNNGKT
YIRSARAYSV LGLSFYDALF LNLSFAGEAA STFGEASDNT FFYPSGDVAW QFTKLKFFER
ANWLSFGKLR ASYGVVGSQP APYRTRTLFV PGNSLYGNGS YLQSANFGND QLRPERKTEY
EVGADLRFLG NRLRTEITYY KNRTKDLLLS VPVPNSTGFS SAYQNAGTMQ NKGIDFDLNY
DIFKRKDLTL SLNFNLNRNR SLVTDLAGAT AVQVGGISGY MTINALEGQP VGVFMGGHYA
RDDQGNKIFD ANGFPTVNAA NAKIGDPNPN WRGGFGANLS YKSFSLGLLF ETFQGGDFFE
GTRGVMYSHG THEDVGKEVT LTRDLKNFRG NVIPAGTTVR GNIADLGAGE VLLDESYYTT
LGGGFSGLKE QFVVDGSWTR LRELSLGYTL QSEAFRKASK LQSIEFRLSG RNLFLWTGVR
GVDPDSNHTQ VSLGRGLDYF DNPGTRSYLF SLLINY
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