Gene Dfer_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1688 
Symbol 
ID8225259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2053237 
End bp2054880 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content41% 
IMG OID644929542 
ProductVitamin K epoxide reductase 
Protein accessionYP_003086094 
Protein GI255035473 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.559526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.233843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGC TTCCGATACC CATATCCTAC GACAATTCAT TCGATATCAT TAGCAAGCTA 
CTTTCGATAT TGGATATTCC TTTTACAAGA AAGGCACTTT TGAGCAAATT AAAGGAACAT
CCTTATCAAT CTAATCTGTT GGGTATTAGC GAGATTTTGG ACGACTACCA AGTAAAAAAC
ATATCAATTG CAACATCAAT TTCTCAACTA CCTCAGCTGC CAACCCCACT TATTACTCAG
ATTGCAGGTG TAGGTAAGGA AGAACTTCGG GCTACTATAG TCAAATCAGT CACGCCAGAA
GAAATTGAAT TTTACGAACT GGAATCCGGT CGATGGCGAC TCGTCGCGCT CCCGGATTTC
GACGTTATTT GGCCGAGCAA GATTGCGATG ATCGTCGATA GTGAAGGGTC GAGTGGAGAG
AAGGGCTATA AAATAAATCT TGTTGTTTCC TTTATTGAAA TTGTACTAAG AATAGCCATT
TTAGCCTCCC TTCCTTTGGT TGTTGCCTTT GTTTCAATTG ATAACTACCG GGAAATCGAT
AGCCAGATTA TCACATTTTT AGCTTACGAG ATTCTACTTT TAATTGGACT TGCCATATCA
GGTTATCTGT TTTGGGTCGA ATGCAGCGAA GATTCATCCA TCCTTAAAAA GGTCTGTCAA
CCAACAAAGA GGGTGAGTTG CGCAGCAGTT TTGAAGAGTC CGGGTGCCAA ACTTTTCGGG
ATTTCTCTTT CCACCTTAGG GAGCTGTTAT TTTTTAGGGT GCTTGCTATC ACTGATTGTA
TTTAGCCCGT TGGACAGGGC GCTGTTATTT CTACTATCAT GGACGAATAT CTTCTCCATG
GTTATGATAA CATTTTCAGT CTACTACCAG GCTTATTCCC TGAAACAATG GTGTTTACTG
TGTCTATATG TTCAATGCAC GTTGCTTGCA CTACTGTCAG TTGGTTTGTG GAATCGATGG
TATATGGTCG ACGACATCAA AGTTAGCGTA CTGCTCACAA GGATAGCTAT TTTGGGATTC
AACCTAGGGA TTTCCCTTGC CGCTCTCTGC CTGCTTCGCT ATGCATACAA ACTTATGATG
GAAAAGGATC GGCTAACATC TGAACTTAAA AAACTGAAAT TTGACCCTTT TTCATTTAAC
GGTCAGCAAG TAAATCAGGC ACATTTGAAG TTACCGGTTG ATAAACTTGG AATTCTACTA
GGTAAAGATA CCGCCAGTCA TCAGATTCTG AAGATTTGTG ATCCATACTG CCCTCATTGT
GCTACTTCTC ATAAAGCCAT TAGCTTGCTG ATTCGCGAGA ACAGTAACGT GAGTGTTCGG
ATCATATTTA CCGCTCCGCC CAACTCAGAA GATGCCAGGT TCCATCCTGT AAAGCACTTT
TTGGAGCTCT ATGAGCCAGG TGATCAAGAA TTGCTCCTCT CGGCAATGGA CTATTGGTAT
CTGTCACCGG ATCGTAGCGT AGAAATGTTG AGAGCAAAAT TTAAGCTGCC TACGAAGGTA
TCAGGCCAAC TCATAAATAT AGAAAAGATG TATATGTGGT GCCGGAATAT GGAAATAACC
AGCACACCGA CGATTTACTA TAACCAAAAA TTGCTAGCTG ACATATACGA TCCACAAGAC
TTGCGATATG TTTTGTCTGA CTAA
 
Protein sequence
MNLLPIPISY DNSFDIISKL LSILDIPFTR KALLSKLKEH PYQSNLLGIS EILDDYQVKN 
ISIATSISQL PQLPTPLITQ IAGVGKEELR ATIVKSVTPE EIEFYELESG RWRLVALPDF
DVIWPSKIAM IVDSEGSSGE KGYKINLVVS FIEIVLRIAI LASLPLVVAF VSIDNYREID
SQIITFLAYE ILLLIGLAIS GYLFWVECSE DSSILKKVCQ PTKRVSCAAV LKSPGAKLFG
ISLSTLGSCY FLGCLLSLIV FSPLDRALLF LLSWTNIFSM VMITFSVYYQ AYSLKQWCLL
CLYVQCTLLA LLSVGLWNRW YMVDDIKVSV LLTRIAILGF NLGISLAALC LLRYAYKLMM
EKDRLTSELK KLKFDPFSFN GQQVNQAHLK LPVDKLGILL GKDTASHQIL KICDPYCPHC
ATSHKAISLL IRENSNVSVR IIFTAPPNSE DARFHPVKHF LELYEPGDQE LLLSAMDYWY
LSPDRSVEML RAKFKLPTKV SGQLINIEKM YMWCRNMEIT STPTIYYNQK LLADIYDPQD
LRYVLSD