Gene Dfer_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1680 
Symbol 
ID8225251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2041728 
End bp2042600 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content57% 
IMG OID644929535 
ProductCatalase 
Protein accessionYP_003086087 
Protein GI255035466 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3546] Mn-containing catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATC ATGACGGAAA GCTTCAGTAC ACCGTGAGGG TCGACAAACC AAACCCTCAA 
TTCGCAAAAT TGCTTCAACA GGCCATCGGC GGCATCGAAG GTGAAATGCG CGTTTGTTTG
CAATACCTGT TTCAGGCCTG GAACTCGCGG GGGCCTCAGA AGTACAGGGA TATGCTGCTC
GAAACCGGAA CCGAAGAAAT TGCCCACATC GAAATGCTCG CTACCGCCGT ATGCCTCAAC
CTGGAAGGTT CGTCCAGCGC CGTGAAGGAC GAGATGGCTA TGAGCAACCC GATGGTCGAA
GCCGTAATGG GCGGACGCGA CCCGCGGCAT ATTCTCTCGG CCGGACTGGG CGCAATGGCC
GCCGACGCCA ACGGCGTGCC GTTTAATGGC TCATGGGTGG TAAGCAGCGG CAACATTGCC
GCCGATATGC ATGCCAATGT AATGGCCGAA ACCACCGGCC GCGTGCTCGC CACGCGGTTG
TACGAAATGA CCGACGACAA CGGGATGAAA GACATGCTCG CATTCCTCAT CGCCCGCGAC
ACCATGCACC AGAACCAATG GATGGCCGTG CTCGAAGAGC TCGGGCCCGA CGCCTATCCT
ATCCCGAACA GCTTCCCGTC GTCGCTTCAA CACGAGAATG TCGCATACAG CTTCCTGAGT
ACGAGCGTCA ACGACATGAG TAATGCAACC GGCCGCTGGA CCGAAGGCGC GTCCATCGAC
GGCAAAGGCG TTTTCCGTTT TGAAAAAGCG GTTCCTACCG GCGGCGCTCC GGTACTGGCA
CCGGCTGACA AGGAAATCCA CGCCCAGGTC GAACAGGGTG TTGCACCCGA CGCGGGCTTT
ATCGATAAGG TAAAGGACAT GATCTCCGGC TAA
 
Protein sequence
MFYHDGKLQY TVRVDKPNPQ FAKLLQQAIG GIEGEMRVCL QYLFQAWNSR GPQKYRDMLL 
ETGTEEIAHI EMLATAVCLN LEGSSSAVKD EMAMSNPMVE AVMGGRDPRH ILSAGLGAMA
ADANGVPFNG SWVVSSGNIA ADMHANVMAE TTGRVLATRL YEMTDDNGMK DMLAFLIARD
TMHQNQWMAV LEELGPDAYP IPNSFPSSLQ HENVAYSFLS TSVNDMSNAT GRWTEGASID
GKGVFRFEKA VPTGGAPVLA PADKEIHAQV EQGVAPDAGF IDKVKDMISG