| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1675 |
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| Symbol | |
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| ID | 8225246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2037724 |
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| End bp | 2039400 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929530 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003086082 |
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| Protein GI | 255035461 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0567929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCA TTACCAAACT GAATCTCGAC AACGACCTGG ATCTGATGCT GGCCCACAAG
CGGTCGATGC AGGTGGCTGA GTTTGCCGGG TTGGGGCTGG TGCATCAAAC CAGCTTTGCG
ACGGCGGTTT CGGAAGTGTG CCGGCTGGTG CTCGATAAGG GCAGCCGCTC GCATATGATG
CTGGGTTTCC TCAAAACACC CCACGGCAAA AACAGCGTAT ATGCGAAGAT CGTCGATACT
TCCATCGGCG ACATCGCGCG GGATAATCCG AACCTGGGCT ACGCACGCCG GCTGGTAAGC
GGTTTCAGCG TCGATCCGGA TTCGATTTTG CTGCTCTTCG AAATGCCCGT CGGCTCCCGG
CTGAGCAGGG AGTACATTAT TAAAGGGCAA AAACTATTTG ACGAAATGCC GCCCGTGACT
CCGTACGAGC AGGCAAAACA GCTGAACATG CAGCTGCAAG AAATGGCCAA TAAACTGGTA
GAGAGCGAAA AACGCTACCA GACATTGACC GACACGATTC CGCTGATGAT GTTTACCCTT
AACGACCAGG GACGCCTTCT TTTTGCCAAC GAGGGTTTCA AACTTTTCGC GGGCAGCGAC
ATTCAGAACG TCGGCGGCAA CTGGATCAAC TGGCTTTCGG GATGCGAGCC AAGCGTGCCC
GTGGAGCAGG TCCGCGAGCA GCTTTCGGGG AATTCGGAGT TTTCGATGGA GATTTCGCTG
ACCAAAAAAT CCAACGGCGA GCGGATCTGG CATCTGCTTT CCATGAGCCC GGTGCTCAAC
TCATCGACCG GCCTTCCCGA ATGGGCGGGC TTCCTGGTCA ACATTCACGC GCAGAAACTG
GTGGAAGAAA CGCTGCGCGA CAATGCCGAG CTGCGCGACA CAAAAAGAGT GTTGCAAAAG
CGCCAGATCG AACTCGATGC AACGATCACG GACTTGAACC GCAAAAACCA GGAACTGGCG
CGCTTTGCCT ACGTGGCTTC GCACGACTTG CAGGAACCTG CCCGCAAAAT GATCGTGTTT
TCCGAAATGC TCAACAGCCG TTTCGGGCAT TTGCTCCCGG CGGACGGAAC GAGCCTGCTC
AACCGGGTCA AATCCGGCTC GGAGCGGATG GTAGCCGTGA TCCGCGACCT GCTCGATTAC
TCCGGCATAT CGGCCGACCA GGACATTGAC GTGCACCCGA TCGAACTGCT CGAAATCGTG
GACCAGGTAA GGGAGCATCT GGACAAGGAA ATCAGCGAAT CCAATGCAGA AATACAGCTA
CGCGGCTCTG CTACGCTGGT CGGCAACAGG CGGCTGCTGG TGCTGCTGTT CCAGAATTTT
GTGGGAAATG CGATCAAATT CGTCAGGGAC GGGGCAGCCC CGCGCATTCA GATTACCTAT
TCTTTCCCGG CCGCGGAAGT GATCGACGCC AACGGCCTCG ACCAGCAAAC GACCTGGGTG
CAGGTGGACG TGAGCGACAA TGGCATCGGA TTTGACGAAA AGCACGTCGA CCGGATATTT
CAGATGTTTC AGCGGCTGCA CACACAGGAT CAGTTCAAGG GCACAGGAAT CGGGCTCGCT
ATTTGCAAGC GGATCATTGA AATGCACCGC GGGAGCATCA GTGTGAAAAG CAAGATCAAT
CAGGGATCTG TTTTCAGTGT TTATTTACCT TACCAAATTA ACCCACCTCT CTTATGA
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| Protein sequence | MHVITKLNLD NDLDLMLAHK RSMQVAEFAG LGLVHQTSFA TAVSEVCRLV LDKGSRSHMM
LGFLKTPHGK NSVYAKIVDT SIGDIARDNP NLGYARRLVS GFSVDPDSIL LLFEMPVGSR
LSREYIIKGQ KLFDEMPPVT PYEQAKQLNM QLQEMANKLV ESEKRYQTLT DTIPLMMFTL
NDQGRLLFAN EGFKLFAGSD IQNVGGNWIN WLSGCEPSVP VEQVREQLSG NSEFSMEISL
TKKSNGERIW HLLSMSPVLN SSTGLPEWAG FLVNIHAQKL VEETLRDNAE LRDTKRVLQK
RQIELDATIT DLNRKNQELA RFAYVASHDL QEPARKMIVF SEMLNSRFGH LLPADGTSLL
NRVKSGSERM VAVIRDLLDY SGISADQDID VHPIELLEIV DQVREHLDKE ISESNAEIQL
RGSATLVGNR RLLVLLFQNF VGNAIKFVRD GAAPRIQITY SFPAAEVIDA NGLDQQTTWV
QVDVSDNGIG FDEKHVDRIF QMFQRLHTQD QFKGTGIGLA ICKRIIEMHR GSISVKSKIN
QGSVFSVYLP YQINPPLL
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