| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1671 |
|---|
| Symbol | |
|---|
| ID | 8225242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2035041 |
|---|
| End bp | 2035907 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644929526 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003086078 |
|---|
| Protein GI | 255035457 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.128227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAG CGATTGTAGA GTCTCTGCGC ACTAAACAAG ATCAGATACT GGATAATTGG
GTAAACCAGC GCGAACTGGC CGACGACTTC CAGGGCAATT TCAATTCATC CGACGACCTC
AAAGCACAAT CGTCCGAACT GCTGGACGTA CTCCTGAAAG CAATCACCGC CGAAAACATC
ACAGACATCT ACTCGGTGGA TCTCGAACCG CTGTTCGATT TCATTTCCGG GCTGACCCTC
TCCCGCGCCA AGCAGGGTTT TTCGCCGAGA GAAACGGCCA CCTATATTTT CTCGCTGAAA
GACGCGCTGT TCAAGGCCCT GGCCGAAATT GTGGGCGACA ACCCGCGTGA ACTGTATGAC
GTTACGCTGG AACTGAGCAA ATTTATCGAC AATATCGGCA TCATCAGCTT CGAAACCTTC
ATCAAGGGAC GTGAGGAAGT GATCCTCAGC CAGGCCGACG AAATGGCCGA GCTATCCACG
CCGGTCATCA AGGTTTGGGA CGGCATTATC GCCATGCCGA TCATCGGCAC GCTCGACAGC
GCCCGCACGC AGGTAGTGAT GGAAAACCTG TTGCAGGGAA TCGTGGAAAA TGAGAGCTCA
ATCGCCATTC TCGACATTTC GGGCGTGCCT GCGGTGGACT CGCTCGTAGC GCAGCACCTG
ATCAAAACGG TAAATGCGAT CCGCCTCCTC GGTGCCGACT GCATTATCAG CGGCATCCGC
CCGGAAATCG CGCAAACAGT GGTGCACCTT GGCATAGATC TTTCCAAGAT GGTTACAAAA
GCCACCCTTG CGGGCGCTTT GAAATTTGCT TTTGGAACGC TGCAACTGGA AGTGAAACGT
ATGCAGAAAG AAAAATTGAA CCCGTAA
|
|---|
| Protein sequence | MTIAIVESLR TKQDQILDNW VNQRELADDF QGNFNSSDDL KAQSSELLDV LLKAITAENI
TDIYSVDLEP LFDFISGLTL SRAKQGFSPR ETATYIFSLK DALFKALAEI VGDNPRELYD
VTLELSKFID NIGIISFETF IKGREEVILS QADEMAELST PVIKVWDGII AMPIIGTLDS
ARTQVVMENL LQGIVENESS IAILDISGVP AVDSLVAQHL IKTVNAIRLL GADCIISGIR
PEIAQTVVHL GIDLSKMVTK ATLAGALKFA FGTLQLEVKR MQKEKLNP
|
|---|
| |