Gene Dfer_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1665 
Symbol 
ID8225236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2025563 
End bp2027761 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content54% 
IMG OID644929520 
Productflavodoxin/nitric oxide synthase 
Protein accessionYP_003086072 
Protein GI255035451 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.664708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCT CCATCTGGCG GTATGCACAT TTGGCGCTGG CATTTGTATC CACGCTGTTT 
CTGGTGATCC TCTCGGTAAC GGGCGTCATC CTTGCATTCG ACGCGGTGAA TGAGAAAATG
CCAGCCTATC GCGTGAGCGA TATCGACGGC ATTACACTCG CGGAATGCAT TCCCGCATTA
AGTAAAGTTT ACCCCGAAAT CATTGAACTT ACGGTCGACC ATAACCAGTT TGTAGCAATA
GACGCTACCG ATGCGGACGG CGAGCCGGTG AAAGCTTACA TTAATCCGCG CAATGGCGCT
GTGCTGGGGC CTGTTGTGCC CAAAAGTGCG TTTATGCAGT GGAATATTGC TTTACACCGT
TCGCTTTTCC TGAAAGAGAC GGGCCGTATC GTGGTCGGGG TGGTGTCCTT TTTGCTATTC
CTGATCACCG TTAGCGGCTT TGTGCTGATC CTCAAACGGC AGCAGGGGCT GCGCCATTTC
TTTGATAGGA TCAACCGCGA TTTTTTCTCC CAATACTTCC ACGTCGTCAC CGGCCGGCTC
TTCCTGGTTC CCATTCTCGT GATCTCGCTT ACGGGCACTT ACCTGTTTAT GATGCGGATC
GGCTTGCTGG AACAAGAAGC AGGCGAACCG GTGCCGACGG AACAGGCTGC CGATGCGGCA
TCTCTTGAAA AAAGCCAATT TCCGGTATTT CAGCAAACCA GGCTGGCGGA GGTGGAAAAG
GTGGAATTCC CGCTGCTGGA AGACGACCCG GAAGAATTTT TTGTGCTCAA ACTCCGAGAC
AAAACGGTCA CCATTAATCA GATCGACGGC AGCATTGTGA GCGAGGCGGC ACAGGCCAGG
GCAGTTGTAT TTGAAAAACT GAGTCTGGAC CTGCACACCG GCCGCACGAA CATCATCTGG
GCCATTGTGC TCGGGCTTTC TTCACTCAAT ATCCTGGCAT TTATCTACAC CGGTTTCGTG
ATGACCTGGA AGCGGACCCG GACGAGCATT AAAAACCGGT TCAAACCCGA AAACGCAGAA
ATAGTGGTGC TGACTGGCAC CGAAAACGGC AGCACGTTAT TTTTTGCCAA CCAAATCCAC
CGGCAGCTGC TCTCGGACGG AAAGCGCTCT TTTCTCGCCG AAATGAACCA GTACCGTGCC
TATCCGCAGG CGAAACATCT CATTATTTTC ACGTCCACCT ACGGCCTCGG CAGCCCGCCC
GCCAATGCCA CGCATTTTGC CGCATTGGTA AAAAAAGTGC CGCAGCAGCA GGACATGACG
TTCAGCGTCG TGGGGTTTGG CTCCAAAGCC TATCCCGATT TTTGCGCATT CGCGATGGAG
GTGGATCAGC TGCTGGAAGG ACAGCAATGG GCCAGACGCT ACCTGGATCT TCACACGGTG
AATGACAAGT CGCCGGAGGA ATTTGTAAAA TGGGTGCATG CATGGAGCGA GCAGTCGCTC
ACGGCCCTGG CTACGGCGCC AGCATTGTAT ACCACCCGGC AGGTAGGGCT GAAAAACCTG
AAAGTAGTAG AAAAAACTTC GGTGAGTGCG GATAATGCCA CTTTCAAAAT CGTGCTCGCA
CCCGAGTCGC GGAATGGCTT CCAGTCGGGC GATTTGCTGG CTATTTACCC CGCGTCCGAC
AGCCGCGAGC GGTTTTATTC CATTGGACAA AACAATGGGA TGATCCAGCT GATGGTGAAG
CTCTACGAAG ACGGCCTGGG CTCGGGATAC CTCTACGGAC TCGAACCGAA CAGCACACTG
AAAGCCCGCA TTATGCCCAA TCCGGGCTTC CATTTCCCGC AAAAAGCGAC AACCGTGGCG
ATGATCGCCA ACGGCACGGG CATCGCGCCG TTTCTGGGAA TGGTGATGAA CAACCGGGCG
AATGTGCCGG TGCGGATGTA CGCGGGTTTC AGGCACGACA ACGAGCTGAC GGCGCATTAC
AGGCAATTCG CTTCGGCGGA AATCGACGAA AAGCGACTGG AAGGCCTGCA TATTGCCTAT
TCCCGCGGAG CCGAACCGCA ATACGTGATG GACCTCATCC GGCGGGATGC CCTGTATTTC
ACGGACTTGC TGGCCAATGA CGGCGTGATC ATGATTTGCG GCTCGCTGAA AATGCAGAAG
GACGTGGAGC TTTTGCTCGA GGATCTTTGT GTTTCAGGAA ATATCCGCGG CCTGAGTTAC
TACAAGGACC GCGGTCAGAT TTTAACGGAT TGTTATTAA
 
Protein sequence
MTLSIWRYAH LALAFVSTLF LVILSVTGVI LAFDAVNEKM PAYRVSDIDG ITLAECIPAL 
SKVYPEIIEL TVDHNQFVAI DATDADGEPV KAYINPRNGA VLGPVVPKSA FMQWNIALHR
SLFLKETGRI VVGVVSFLLF LITVSGFVLI LKRQQGLRHF FDRINRDFFS QYFHVVTGRL
FLVPILVISL TGTYLFMMRI GLLEQEAGEP VPTEQAADAA SLEKSQFPVF QQTRLAEVEK
VEFPLLEDDP EEFFVLKLRD KTVTINQIDG SIVSEAAQAR AVVFEKLSLD LHTGRTNIIW
AIVLGLSSLN ILAFIYTGFV MTWKRTRTSI KNRFKPENAE IVVLTGTENG STLFFANQIH
RQLLSDGKRS FLAEMNQYRA YPQAKHLIIF TSTYGLGSPP ANATHFAALV KKVPQQQDMT
FSVVGFGSKA YPDFCAFAME VDQLLEGQQW ARRYLDLHTV NDKSPEEFVK WVHAWSEQSL
TALATAPALY TTRQVGLKNL KVVEKTSVSA DNATFKIVLA PESRNGFQSG DLLAIYPASD
SRERFYSIGQ NNGMIQLMVK LYEDGLGSGY LYGLEPNSTL KARIMPNPGF HFPQKATTVA
MIANGTGIAP FLGMVMNNRA NVPVRMYAGF RHDNELTAHY RQFASAEIDE KRLEGLHIAY
SRGAEPQYVM DLIRRDALYF TDLLANDGVI MICGSLKMQK DVELLLEDLC VSGNIRGLSY
YKDRGQILTD CY