| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1657 |
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| Symbol | |
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| ID | 8225228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2013351 |
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| End bp | 2016719 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929512 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086064 |
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| Protein GI | 255035443 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.653698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC GAATACGCCT CCATCCTCTC ATCGTGCAAA TTATGAGGAT CACCATTCTA
CAATCGATTT TACTATGTAT CGGCATTTCG CTGGGGTACG CGCATGAAGG GCGCACCCAG
GACCTGCTCG ACCGCTCCAT TACGATCCGG GCCGAAAACA CCGAGATCCG GAAAGTGCTC
GCGCAAATCG AGAGCAAGGC GAAGGTGGAG TTCGTGTACA GTTCCAATGC CATTGGCGCC
GATCGGAAAA TCAGCGTGGT GGCCATTGAC CGGAAGTTAT CGGACGTTCT CAATATGGCT
TTGAAGCCCC TCAACATTAC ATATAGCATT GTCGGCGGGC AAATCATGCT GCGGAAGGTG
CCGGAAAAAG CAGCAGAGCC CCGGCCGCAA AAAGAAGAGG CGGTGGTGGC TGACAAGCAG
GTGTCCGGCA AGGTGACCGA CGCGAAAGGC GGAGCGTTGC CCGGCGTCAG TATCATTTTG
AAAGGCTCCC AACAGGGAAC GATCTCCGAT GCCGACGGTG CATATTCAAT CAGCGTGCCG
GATGAGAATG CCGTGCTGGT ATTTTCATTT GTGGGCTACA TAAGCCAGGA AATCGCCGTC
GCCAACCGCG CCCAGGTGGA TGTGATGATG GCCGACGACG AGAAGTCGCT GGATGAATTG
GTAGTGGTGG GGTATGGAAA ACAATCGACG CGGCAGCTTT CGAGCTCCGT CGCAACGGTA
AGCGGCAAGG ATTTTGCGGA CCTTCCCGTT TCACAATTCA CCCAAAAATT GCAGGGCAAA
CTGGCGGGCG TGCAAATATC CCAGGCAACC GGCACTCCCG GCGCGGGCAT GACCGTGCGC
ATCAGAGGGG CCGCTTCCCT CAATGCCGGC GCCGATCCGT TGTATGTGAT TGACGGAAAC
CCCATTGTGG GCAGCATCAG CAATATCAAC CCGAATGAGA TCGAGAGCAT CAGCGTACTG
AAAGACGCCT CGGCCACGGC CCTGTACGGT TCCCGCGCAG CCAATGGGGT GGTGCTGATC
GAGACCAAAA AAGCAGTCGC AGGCCAGACG CGCATCGATT ACAGCGCCTA TTTCGGGATT
CAGCAGGTGC CGCAGCGCGG CCGCCCCGAT ATGATGAACG CCCGCGAATT TGCCACCTGG
CGCAAGGAAC TGGCCGAGGA ACGCGGCCTG GATGTGGACC CGGTGTTCCA AAATCCTGAA
CAATATGGCG AGGGTACCAA CTGGTTCAAT GCGATTACCC GCACGGCCCC TATGACCGAA
CATAGCCTGT CGCTCAGCAC CGGAACGGAG AAGTTCAGCA CCACGGCGAC TGCCGGGTTT
TTGAACCAGG ACGGCGTGGT GCTGGGATCG GGATACAAAA GATATTCGCT GCGCATCAAT
ACCACTTTCC GGCCTGTCGA AAAACTGACC ATCGGCCTGA ACGTGGCACC GACTTACGCT
ACCAATACCA ACAGCGGCAT CGACAATGTA GGTGGGGATT TCAACGAGGC TTTGCAAACC
TCCCCGCTGG CGCCGTTGAG AAACCCGGAC GGCAGCCTGA CGCTGAAAGC GACTTCTCCG
GGCATGTTTG ACACACCCAA TTATGCGAGA ACGCTTACCG ACCGCGTGGT GAACAACAGC
AATACCCGTA TCCTGTCCAA TCTTTTCGCG GAATATCAGC CCATTAAGGG CCTGTACCTG
CGTACATCGG GCAATATCGA TATGGGCGAT TCGCGAAACT TCCTGTTTAA GGGAACGACC
ACCGGCGAGC GTGGCGTCGG ACTTTACAAA ACACCTACCT CGGCGTTGAG CGAAAGCTCC
TATCTCTCGT GGGTGAATGA AAACACAGCG AATTATACAA AAGAAATCGG CGACCATAAC
TTCGATGCAT TGGTTGGTTT TACGGCGCAA AAATTCAAAC AGGACAATAG CGCTATCAAC
GGCAGCAATT ATCCCGACGA CAAAGTGCAG ACTATCAGCG CAGCCGGGAC GATCACCGCT
TCGAGCAGCA TTCAGGAATG GAGCCTGCTG TCTTACCTCG CCAGGCTGAA TTATAATTTC
AAAGGGAAAT ACCTCGTGTC GGCCTCGATT CGCCGCGATG GCTCGTCCCG CTTTGGCGCG
CAGAATCGCT GGGGGAACTT TCCGTCGCTG TCGCTAGGCT GGATTTTGTC TGAAGAAAGC
TTCATGGCGG ATATGCGCAC GATCTCGTTT CTGAAACTGA GGGCGAGCTA CGGGGTTACC
GGCAATTTTA ATATCGGCAA TTACAGCCAC ATTCCTACCA TTTCCACTGC GAACTATGTG
TTCGGCGCAG GCGTGGCCGG GGGCAGGAGG GTGGATAATC TGGCCGATGA GGGCATCGGC
TGGGAGTCTA ACAAACAGCT CAATATCGGG TTGGATGTGA ACCTTTTCAA CGACAGGATC
AATGTTACCT ACAACTATTA CCGCAAGAAC ACCAGCGATT TGCTATTTAA CGTGGGTGTT
CCAAGGGCTT CGGGATATTC GAATATCCAG ACCAATATCG GTGAATTGAA GTTCTGGGGA
CATGAGTTCT CCGTCAGTAC GACCAATATC CAGCGCAAAG CGTTGAGATG GACTACCGAT
TTCAACATTT CGTTCGACCG GAACGAGGTC GTTTCGCTCG GAAACAAAAC TTCCAAACTC
ATTACCGGCC CCGGCAGCGG CGTGATCGGC GGCTCGCACA TTACCATCGT CGGTCAGCCG
ATCGGAATGC TTTACGGCAT GGACCATTTG GGGGTTTATA AAGATCAGGC GGATTTCGAC
CGTTTTCCCA AGCATACCAC GTCACAGGTG GGCACGGTGA AATTCCGTGA TGTGGACAAC
GACGGTGCCA TCACGGTTAA CGACGCGACG ATCATCGGCA ATCCGCATCC TAAATTCATT
TTCGGGATGA CCAACTCGCT GCAATACAAT AGCTTCGATG TGTCGGTTAC GTTGTCGGGT
ACCTATGGGA ATGATATCCT GCGCGGCTCG GAGCAGACGC TCACCAACCT CGACGGCGTA
TTCAACGTGC TGGCCGATGT GAAGGACCGC TGGCGGTCGC CCGAGAACCC GGGCAAGGGC
CGTTATGGAA GCCTGGCGGC AGGCACCACC GGCCTCGAAC GCGACTGGTG GGGCAGCCAG
ATGTTGTACA AGGCAAGCCA TATTTCGGTG AACAACGTTA CGCTGGGCTA CACCGTTCCG
CTGAAAGCGA CCAGGGGCGT GAAAAGGCTC AGAGCTTATG CGAGCGTTCA GCAGCTGCAT
ATTTTCACCA AATACCCGGG AGCCAACCCG CAGGTTGCCG TCAGCACGGC GTCCACCGGT
CTGGGTATCG ACGGCGGCTC GTATCCCGTA CCGCGCACTT GTACGATCGG CGTGAACGTC
GGATTCTAA
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| Protein sequence | MKKRIRLHPL IVQIMRITIL QSILLCIGIS LGYAHEGRTQ DLLDRSITIR AENTEIRKVL
AQIESKAKVE FVYSSNAIGA DRKISVVAID RKLSDVLNMA LKPLNITYSI VGGQIMLRKV
PEKAAEPRPQ KEEAVVADKQ VSGKVTDAKG GALPGVSIIL KGSQQGTISD ADGAYSISVP
DENAVLVFSF VGYISQEIAV ANRAQVDVMM ADDEKSLDEL VVVGYGKQST RQLSSSVATV
SGKDFADLPV SQFTQKLQGK LAGVQISQAT GTPGAGMTVR IRGAASLNAG ADPLYVIDGN
PIVGSISNIN PNEIESISVL KDASATALYG SRAANGVVLI ETKKAVAGQT RIDYSAYFGI
QQVPQRGRPD MMNAREFATW RKELAEERGL DVDPVFQNPE QYGEGTNWFN AITRTAPMTE
HSLSLSTGTE KFSTTATAGF LNQDGVVLGS GYKRYSLRIN TTFRPVEKLT IGLNVAPTYA
TNTNSGIDNV GGDFNEALQT SPLAPLRNPD GSLTLKATSP GMFDTPNYAR TLTDRVVNNS
NTRILSNLFA EYQPIKGLYL RTSGNIDMGD SRNFLFKGTT TGERGVGLYK TPTSALSESS
YLSWVNENTA NYTKEIGDHN FDALVGFTAQ KFKQDNSAIN GSNYPDDKVQ TISAAGTITA
SSSIQEWSLL SYLARLNYNF KGKYLVSASI RRDGSSRFGA QNRWGNFPSL SLGWILSEES
FMADMRTISF LKLRASYGVT GNFNIGNYSH IPTISTANYV FGAGVAGGRR VDNLADEGIG
WESNKQLNIG LDVNLFNDRI NVTYNYYRKN TSDLLFNVGV PRASGYSNIQ TNIGELKFWG
HEFSVSTTNI QRKALRWTTD FNISFDRNEV VSLGNKTSKL ITGPGSGVIG GSHITIVGQP
IGMLYGMDHL GVYKDQADFD RFPKHTTSQV GTVKFRDVDN DGAITVNDAT IIGNPHPKFI
FGMTNSLQYN SFDVSVTLSG TYGNDILRGS EQTLTNLDGV FNVLADVKDR WRSPENPGKG
RYGSLAAGTT GLERDWWGSQ MLYKASHISV NNVTLGYTVP LKATRGVKRL RAYASVQQLH
IFTKYPGANP QVAVSTASTG LGIDGGSYPV PRTCTIGVNV GF
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