| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1620 |
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| Symbol | |
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| ID | 8225191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1960418 |
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| End bp | 1963462 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929475 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003086027 |
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| Protein GI | 255035406 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.603085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.770482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT CTGTATTCAA AAATCCCCGG TCCGGACGAT CGGGGCAATG GATTTCCTGG
CTGGCAGTGC TGACGTGGCT GGTCGTTTCG ACGGCTTTTG CCGGTCCGGC CGCCGAGCTG
ACGGGCAAGG TGACCGACAA AGACGGCGCC GCGCTGCCGG GTGTGAACAT CCAGATCAAA
GGCACAAACC AGGGCACGGT AACGGACGCC GACGGGAATT TTCACCTCGA TGTGGCCGAA
GGGCAGGAGC TGGTCGTCTC ATTTATCGGC TATGTGAGCC AGCAGGTGCG GCCGGGGAAC
AAAAGCAGCC TCACCGTGAA GCTGGAAGTG GACCAGCGGC AGCTGAACGA GGTGATCGTG
GTCGGCTATG GCACGCAGGA ACGTAAAAAT GTGATCGGTT CCATTACCAA AGTGGACCCT
ACCGACGTGA AAAGTATCCC GGTGGGCAGT TTCGATGCCC AGCTTCAAGG AAAAGTCCCC
GGCGTGCAGA TTACCTCCAA CACCGGCGTG CCCGGCGAAG CGGTAACCGT GCGCGTCCGG
GGCGCCACAT CGATCAACGG CGATAACGAC CCGCTGTATG TGATCGACGG CGTGTTTATG
AACAGCAACA GTATGCAAAC CACCAATACC GGTGGCAAGG CCACGTCGCC CATCGCCGAC
ATTAATCCCA ACGACATCGA GAGCCTCGAA GTGCTCAAAG ACGCCGAAGC GACCGCATTG
TACGGCTCGC GCGGTGCAAA CGGGGTCATT ATCATCACCA CCAAGAGAGG CAAGTTTAAC
CAGAAAGCCA AGGTGAGCCT CAATGCCTCC TACGGCTGGG CGAAAGCGGC TAAGTTGTGG
GACCTCACCA CGGGCCCCGA GCACGCGGCG CTGGTGAACG AATGGTGGAT CAACACCGGC
AAAGACACGC CGTCGCTGAA CCGCACCGAG GCCAACCGCC CGTTCCGTCC CGTTTCCGAA
GGCGGCCGCG GCCTGCCCGA AGAGCAAAAG ACCTACGACC GCCTCGGCGA GGTTTTCCAG
ACCGCGCCTT TGCAGAACTA TGACCTGTCG GTGTCGGGCG GGACGGCTTC CACCAAGTAC
TACATTGGCG GCGGCTACAC GGGGCAGGAG TCGATTTTGA AGCCGATTAC CTTCAATCGC
GCGAGTTTTA AAGTAAACCT GGATCAGAAG ATTTCGGACA AAATCCAGGT GGGTGTGAGC
AACAGCTTCG CGCGCACGTT CCGTAACCAG GCACGCGCCG GCGACGGCCC CGCGGGCGGA
CTTTTGCAGG CGGCATTGCA CACGCCCACT TACCTTTCGC CCACGAACGA AAATGGCGAG
CTGGTAGGCC GCGCGGGTTT CGATAACGTG AGCCTGCTGC TGGATAATTA TGATGTGAAA
TCAGTGAGCC TGCGCTACAT CGGTAACCTT TACGCCGAGG CCGATATTTT GCCTAACCTC
AAATTCCGCA CAAGCTGGGG GCTGGATTTC AATAACTACG ATGAAAATGA ATATTGGAAC
ACCTACCTCA TCACCGGCAG CCCGAATGGC TTTGCATCCG CAAACAACGG CCAGGCCACG
ACCTGGCTCA ATGAGCAGAC GCTTTCCTAC CGTCAGAAGA TCGGTTCAAA ACATTCGTTC
GGTGTGCTGC TGGGTAACAC CATTCAAAGC GATCTGAACA CCGGTACAGC GGCTACGGGG
CGCGGTTTTG CCAGTAATTC TTTTAAACTG ATCACTTCGG CGGCCACTAC GACCGGTTCG
AGCAGCTGGT CGAAGAAAAA TCTGGCCTCG TTCTTCTCCC GCATTGATTA CAACTATGGC
GGCAAATACT TGCTCGATTT CAGCATTCGT GCGGATGGCT CGTCGAGCTT CGGGGCGGAT
CGCAAATGGG GCTATTTCCC GTCGGTAGGC GGCGCGTGGC GTGTGAAGCA GGAGGATTTT
CTCAGAAATT CATCCACGAT CAGCGACCTC AAAATCCGCG CGAGCTACGG TGTAACGGGT
AACCAGAACG GCCTCGGCAG CTTTGCCGCG CGGGGCCTTT GGAGCAGCGG CGCGTCGTAC
CAGGGCAACC CCGGCATCGC TCCTCAGCAG CTCGCCAACC CCGATCTGCA ATGGGAGCGT
ACCAACCAGC TCAATGCAGG CGCCGACATC GCATTCTTCG GCGATAGGCT GGGCATTGAG
TTCAATGTTT ACCGCAAATA CACGAGCAAT GGCCTGCTTT CACTCACATT GCCCGCCACC
ACCGGTTTTG GCAGCTTCCG CAGCAATACG GCCGAGATCA GCAACAAAGG TTTCGAGCTC
GCGATCCGCT CGGTGAATTT TCAGAACAAC ACATTCTCCT GGATCACGAC ATTCAATGTG
GCCCGGAATG TCAATAAAAT CGAAAAGCTG GAAAACCCGC TCGAATACGG CAGCCGAAGC
CTGATTTTGC TTCAACAAGG CCATCCGCTC TATTCTTTCT GGGTATACAA GCAGCTGTAT
GTAGATCCGC AGACGGGTAA CACCGTGTAT GAAGACGTGA ACAAAGACGG CAAGATTACC
GTCGCCGACC GGCAGATCAA CGGCAGTATC TGGCCGAAAT TTTACGGCGG ACTCACCAAT
TCGATCACCT ACAAAGGCTT TGATATCAAT GCTTTCCTCG CATTTAGCTA TGGTAACAAG
GTGTACAACC ACAACAAGTT CTTCGGCGAA GGCGGCGGTG CCCGCGACGC GGCGCGCGTG
ATTTTCGCGA GCAACAACGA CCGCTGGCAG CAGCCGGGCG ACATCACCGA CGTGCCCCGC
CCCGACGGCG TGAATGTGAA CAACTATCGC GACGGCGGCA GCCGCTGGCT CGAAGACGGC
TCGTTTGTGC GGTTGCGGAA TCTCACCGTC GGCTACACCA TTCCCGTGCG ACACATCAGC
TCATTGCGCA TTTACGCCAC GGGCAGCAAC CTGTTCACCA TCACCAAATA CACCGGCCTC
GACCCCGAAT CGAGCTCATC GAGCGGGCAA AACGAGCAAG GCATCGACCT CGGTACGCCG
CCGCAGCCGC GCAGCTTCCA GCTGGGTGTT AACCTGACAT TTTAA
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| Protein sequence | MKRSVFKNPR SGRSGQWISW LAVLTWLVVS TAFAGPAAEL TGKVTDKDGA ALPGVNIQIK
GTNQGTVTDA DGNFHLDVAE GQELVVSFIG YVSQQVRPGN KSSLTVKLEV DQRQLNEVIV
VGYGTQERKN VIGSITKVDP TDVKSIPVGS FDAQLQGKVP GVQITSNTGV PGEAVTVRVR
GATSINGDND PLYVIDGVFM NSNSMQTTNT GGKATSPIAD INPNDIESLE VLKDAEATAL
YGSRGANGVI IITTKRGKFN QKAKVSLNAS YGWAKAAKLW DLTTGPEHAA LVNEWWINTG
KDTPSLNRTE ANRPFRPVSE GGRGLPEEQK TYDRLGEVFQ TAPLQNYDLS VSGGTASTKY
YIGGGYTGQE SILKPITFNR ASFKVNLDQK ISDKIQVGVS NSFARTFRNQ ARAGDGPAGG
LLQAALHTPT YLSPTNENGE LVGRAGFDNV SLLLDNYDVK SVSLRYIGNL YAEADILPNL
KFRTSWGLDF NNYDENEYWN TYLITGSPNG FASANNGQAT TWLNEQTLSY RQKIGSKHSF
GVLLGNTIQS DLNTGTAATG RGFASNSFKL ITSAATTTGS SSWSKKNLAS FFSRIDYNYG
GKYLLDFSIR ADGSSSFGAD RKWGYFPSVG GAWRVKQEDF LRNSSTISDL KIRASYGVTG
NQNGLGSFAA RGLWSSGASY QGNPGIAPQQ LANPDLQWER TNQLNAGADI AFFGDRLGIE
FNVYRKYTSN GLLSLTLPAT TGFGSFRSNT AEISNKGFEL AIRSVNFQNN TFSWITTFNV
ARNVNKIEKL ENPLEYGSRS LILLQQGHPL YSFWVYKQLY VDPQTGNTVY EDVNKDGKIT
VADRQINGSI WPKFYGGLTN SITYKGFDIN AFLAFSYGNK VYNHNKFFGE GGGARDAARV
IFASNNDRWQ QPGDITDVPR PDGVNVNNYR DGGSRWLEDG SFVRLRNLTV GYTIPVRHIS
SLRIYATGSN LFTITKYTGL DPESSSSSGQ NEQGIDLGTP PQPRSFQLGV NLTF
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