Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1611 |
Symbol | |
ID | 8225182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1949793 |
End bp | 1951961 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644929467 |
Product | Glycerol dehydrogenase (acceptor) |
Protein accession | YP_003086019 |
Protein GI | 255035398 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.670617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGAA TATCCCGATT CAGAAAACAT TTTTCCAACA ATAACCTCCT CCTCATTCCC GCAATCGCCG CATTTGCCGG CCTGGTAGCT TACCAAACCC GCCAGTCCGA CGACCGCTCC TGGGGCGTGT ACAAGGCCGA TGCCGAAAGT ACCAGCTATT CGCCCCTCGA CCAGATCAAC ACATCGAATG TAAGCCAGCT TAAACCGGCC TGGACGCATT CCTACCACGA TATGAAGGAT GGAAGCAGGC CCGGAAACAG CGAATGCAAC CCCATCGTGG TGGACGGCGT GATGTACACC ACCTCTGCCC GGCATTGGGC CTATGCGATC AACGCGCGCA CCGGGGAGCA GCTCTGGGCG TTCGACCCGT TTGACGGGGC CGAAGGCGGC GGGGTAAGCC GCGGCGTTAC CTACTGGGAG GATGGCCAGG ACAAACGTAT CCTCTTCACC GGTGGAGATA ACCTCTTCGC GCTCGACGCC CGCACGGGCA AGCCCATCCC AGGTTTCGGC CAAAACGGCC GGGTGAGCAT GAATGTGGGC TTGCGCGACC ACCCGGCGAC CATTTCGGTG ATTCCTACTT CGCCCGGCAT TGTGTACAAA GACCTGCTCA TTATGGGCGC CGAGGTTTCG GAATTATACG GCGCACAGCC CGGCTATATC CGGGCCTACA ACTGCAAAAC CGGCAAATTG GAATGGACAT TCCACACCAT TCCCCTTCCC GGAGAGCCGG GCTACGAAAC CTGGCCCAAA GATGCTTATA AATATGCAGG TGGCGTGAAC GACTGGGCCG GCATGAGTGT AGACGCCCGC CGCGGCATCG TGTTCCTCGC TTTGGGCTCG CCTTCCTACG ACTTCTACGG CGCAGACCGC CATGGCGACA ACCTGTACGG CAATAGCGTT GTGGCCCTGG ATGCGGCTAC GGGCAGGTAT ATCTGGCATT ACCAGCTAGT CCATCACGAT TTGTGGGACT ACGACCTTCC CGCTCCTCCC AACCTGGTGA CCGTCAACCG CGACGGCCAA AAGATCGACG CTGTGGCGCA GGTGACCAAG CATGGGTTTG TATTTGTATT TAACCGCGAA AACGGGGAAC CGCTGTTTCC GATCGAGGAA AGAAAAGTGC CGGCGTCCAA CATTCCGGGC GAGCGGGCCT CTCCTACCCA GCCATTCCCG CTGAAACCCA AGCCTTTTGC ACGACAATGG ATGACGGAAT CCGATTTGAC GCATTATACC GATGCCGGCC ATGATTCGCT CGTGAAGAAA TTCCGCTCCA TGCGCTATGA AGGCCTTTTT ACACCGCCCG ACCTGAAAGG CACGCTTATG CTGCCGGGCA CACGCGGCGG TGCCGAATGG GGCGGCGCTG CCTACGAGCC GGCCTCGACG GTGCTTTTTG TAAAGTCCAA CGATTCGCCC GAAATACAAT CAATGAAGAA GGTAGACCCT GAGCAGGAGG CCAAAGACCA GACGGTTTTC GACCAGGGCA AAACATTGTA CATGACCTAT TGCATGGCCT GCCATGGCAA GGACAAGAAC GGCGATGAGC CCAACTACCC GTCGCTGATC GGCCTCCGCA GCCGCATGAC CCGCGAGGCG GCGCTCGACA AGATCAAAAA AGGCGGCGGC AAGATGCCTG CATTTGCCTC GGCGATCAAG GGGAAGGAAA AGGGCATCAT CGCATTCCTG TTCGACCGCC CGCAAAATTC CGCCAAAGTG ACGAAGCAGG AAACCGGACA AACACAAAAA GGCGCCGACA AATACCTGAA CCTAACCGCC TACGGCCATT TCAGAGATCC GCAAGGCAAC CCGGCGCTGC GTCCGCCGTG GGGAACACTC AATGCAATCA ACCTCAGCAC GGGCGACTAC GAATGGCAGA TACCACTCGG CAACGACGAG AAACGGCAGG AAAACGGCGG CCCCGAAACC GGCCAGGAAG GCTCGGCGGG CCCTATCGTC ACCGCCGGCG GACTGATATT CATCAGCGGA ACGCTGGACC GCAAGCTTCG GGCATTCGAT AAAAAGAACG GCAGACTCGT TTGGCAAACT ACGCTCCCGG GCGTGGCCAA TGCTACTGCC TGCACGTACA TGAGCGGCGG GAAGCAGTAT GTGGCGCTGT CGGTGGGTGG CACGAAGGAG AATCCGTCGG GTTTTGTGAT GGCGTTTGCG GTGCCGTAA
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Protein sequence | MIGISRFRKH FSNNNLLLIP AIAAFAGLVA YQTRQSDDRS WGVYKADAES TSYSPLDQIN TSNVSQLKPA WTHSYHDMKD GSRPGNSECN PIVVDGVMYT TSARHWAYAI NARTGEQLWA FDPFDGAEGG GVSRGVTYWE DGQDKRILFT GGDNLFALDA RTGKPIPGFG QNGRVSMNVG LRDHPATISV IPTSPGIVYK DLLIMGAEVS ELYGAQPGYI RAYNCKTGKL EWTFHTIPLP GEPGYETWPK DAYKYAGGVN DWAGMSVDAR RGIVFLALGS PSYDFYGADR HGDNLYGNSV VALDAATGRY IWHYQLVHHD LWDYDLPAPP NLVTVNRDGQ KIDAVAQVTK HGFVFVFNRE NGEPLFPIEE RKVPASNIPG ERASPTQPFP LKPKPFARQW MTESDLTHYT DAGHDSLVKK FRSMRYEGLF TPPDLKGTLM LPGTRGGAEW GGAAYEPAST VLFVKSNDSP EIQSMKKVDP EQEAKDQTVF DQGKTLYMTY CMACHGKDKN GDEPNYPSLI GLRSRMTREA ALDKIKKGGG KMPAFASAIK GKEKGIIAFL FDRPQNSAKV TKQETGQTQK GADKYLNLTA YGHFRDPQGN PALRPPWGTL NAINLSTGDY EWQIPLGNDE KRQENGGPET GQEGSAGPIV TAGGLIFISG TLDRKLRAFD KKNGRLVWQT TLPGVANATA CTYMSGGKQY VALSVGGTKE NPSGFVMAFA VP
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