Gene Dfer_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1603 
Symbol 
ID8225174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1934279 
End bp1935802 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content54% 
IMG OID644929459 
ProductLevanase 
Protein accessionYP_003086011 
Protein GI255035390 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1621] Beta-fructosidases (levanase/invertase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA AATTCATAAA TATGAAAAAA CTAACAATAC TGGCGGCGTT ACTAACCACG 
AACTTCGCCC ACGCGCAGGA AACCCCCGAA AAGTACCGTC CGCAGTTCCA CTTCTCGCCC
AAAGCGAACT GGATGAACGA CCCGAACGGG ATGGTGTTCC ATAACGGCAC CTACCATTTG
TTTTACCAGT ATTATCCCGA TGCCAAAGTG TGGGGCCCGA TGCACTGGGG CCACGCTACG
AGCAAGGATA TGCTGCATTG GAAAGAGCAG ACGATTGCAC TATACCCGGA CAGCCTCGGC
TACATTTTCT CGGGAAGCGC CGTGGTGGAT GTCAACAACA CTTCCGGCTT CGGGAAAGAC
GGGAAGGCGC CGCTGGTGGC CATATTTACA CACCATAACC CGGTGATTGA AAAGCAAAAA
ACCGGCCTCC ACGAATACCA GAGCATTGCA TACAGCCTCG ACGACGGTAA GTCCTGGACG
AAATACAGCG GCAACCCGGT ACTTCCGAAT CCGGGCATTA CCGACTTCCG CGACCCGAAA
GTGTGCTGGT ACGAACCGCA AAAGAAATGG GTGATGACCC TCGCTACCAA AGACCGCATT
ACGTTCTACT CCTCGCCCGA CCTCAAAAAA TGGTCGAAGG AAAGCGAGTT TGGCGCCAAC
GCCGGCGCGC ACGGGGGCGT GTGGGAATGC CCCGACTTGT TCCCGCTCAT GCACGAAGGC
AAGCAGGTGT GGGTGCTGAT TGTGAATATC AACCCCGGCG GCCCGAATAA AGGCTCGGCC
GGGCAGTATT TCCTCGGCGA TTTCGACGGC AAAACATTTA CGGCGAATTC CAGCAAAACC
AAATGGCTTG ACTGGGGCAC CGATAATTAT GCCGCCGTTA CGTTTTCTAA CACCGGCAAC
CGCAGGCTCC TCATGGGCTG GATGAGCAAC TGGCAATATG CAAACCAGGT GCCTACCGAC
CCGTGGCGCA GTGCCAACAC CATTTCCCGC GAGCTCGCGC TCACGGCCGT GGACAAGGAA
CTGTACCTTA CGTCCGTACC GGCACGTGAA CTGGACGCCA TTGAGGAAGG GGGTTATTCC
AAACAAAATA TGGCCGCGAA AGCACCGGTG AACCTGGCCC CTAAAAGCGG CAACCCCTCG
GGGCTTTTCC GGCTGGATTT TGAGACCGCC TCGGTGGCCG ATTTTGAACT TGTACTGTCC
AATAAGGCCG GTAATGAGCT GCTGATTGGC TACGACCAGG CAAGCAACCA ATATTATATC
GATCGGTCGA AGTCGGGCAA GACGGATTTT GAAGCGGGAT TTGCACAAAA ACACTTTGCC
CCGAGGTTAT CCAAAAACGG CAAGATCGAC TTCACGCTTG TGGCAGATGT GGCATCGGTT
GAGGTTTTCG CCGACGGCGG GCTCACGGTG ATGACGGACA TCTTCTTCCC CGAAACTCCG
CTTTCCGAGT TGAGTATCAA GTCGGTGAAA GGCATTCAGG TGAAGGATTT ACAGTATAGT
ACCCTAAAAC CCTCGATGGA ATAG
 
Protein sequence
MIDKFINMKK LTILAALLTT NFAHAQETPE KYRPQFHFSP KANWMNDPNG MVFHNGTYHL 
FYQYYPDAKV WGPMHWGHAT SKDMLHWKEQ TIALYPDSLG YIFSGSAVVD VNNTSGFGKD
GKAPLVAIFT HHNPVIEKQK TGLHEYQSIA YSLDDGKSWT KYSGNPVLPN PGITDFRDPK
VCWYEPQKKW VMTLATKDRI TFYSSPDLKK WSKESEFGAN AGAHGGVWEC PDLFPLMHEG
KQVWVLIVNI NPGGPNKGSA GQYFLGDFDG KTFTANSSKT KWLDWGTDNY AAVTFSNTGN
RRLLMGWMSN WQYANQVPTD PWRSANTISR ELALTAVDKE LYLTSVPARE LDAIEEGGYS
KQNMAAKAPV NLAPKSGNPS GLFRLDFETA SVADFELVLS NKAGNELLIG YDQASNQYYI
DRSKSGKTDF EAGFAQKHFA PRLSKNGKID FTLVADVASV EVFADGGLTV MTDIFFPETP
LSELSIKSVK GIQVKDLQYS TLKPSME