| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1602 |
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| Symbol | |
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| ID | 8225173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1932508 |
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| End bp | 1934220 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929458 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003086010 |
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| Protein GI | 255035389 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.71543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA AATATATTTT CGGTCTGATG GTCAGCGGGA CGATGCTGAT CGGGACTTCC
TGCAACGACT TCCTAGATTA CCAGCCGGAA GGGCTGCTGT CGTCGGAAAA TATCAAATCC
GCCTCGGCGG CCGAATCGCT GGTTACCGCG GCCTATGCGG GCATCGGCAA CGACGAAATG
ATCGGCCCGA TGACCAGCAT GTGGGTGTAC GGCAGCGTAC GGTCCGACGA CGCCTACAAG
GGTGGCGGCG GCGTGTCGGA CGTTGCGGAA GTGGATTTTT ACGAGCATTA CAACCTCACC
CGGCCTGACT TCGGGATGAT GCACCCATAC ACCTGGGAGA ATTTCTATAA AGCGATTTCC
CGTGCCAATG CGGCGCTCAA CAGCCTCAAC GGGATTACCG AGGCCGAGTT CCCGCTGCGC
ACCACGCGCA TGGCCGAAAT GCGATTTCTG CGCGGGCATT CGCATTTTAT GCTCAAAATG
CTTTTTAAAA ACATCCCCTA TATCGATGAG AAGCTATCGA GCGACGACAT TCTGAAAGAG
TCCAACGTCC GGTATAACCA TGACGAGCTT TGGAATAAAA TCGGGGAAGA TTTTCAGTTT
GCCGTCGATA ACCTTCCGCA GAAACAGGCG CAGGTCGGGC GCGCGAACAA GCTGTCGGCA
GCGGCTTACC TGGCCAAATT GCGCCTTTTC CAGGCTTACG AGCAGGATGC GAACCATCAA
GTAACGGGCA TTAACAAAAA CCGTTTGCAG GAAGTAGTGA CGCTCACGCA GCAGGTGATC
GCCTCGGGCC AATACAGCCT CCAACCCGAT TTTGCGGAGA ACTTCATTGC CGAAACCGAG
AACGGCCCTG AATCCATTTT CGCCATTCAG TACTCGATCA ATGACGGCAC GGCTGCCGGC
CGCCTCAGCT ACGTGACCGG CCTCAACTAC CCGCACGGCG CGCCGCAATA CGGCTGCTGC
GGATTCCACC AGCCGAGCCA GAACCTCGCC AATGCCTACC GCACGGACGC GAACGGTCTG
CCGCTTTTCG AGACATTCAA TGATAAAAAC GTAGATTTCG CGAATGAAAC CGTCGACCCG
CGCGTGGACC ACACCATCGG CATTGATGGC CACCCTTACA AATACGACGC CACGAAGCCA
TTCAGCAACG CCTGGGTGCG CGATCCGGGC GTGTACGGAT TTTTCCACAC CATGAAAGAG
CAGCAACTGG CCACCAGCCC GTCGTACCAT AAAGAAGGGC CATTTATCGG CAGTTCCAAA
AACATCGACA TTATCCGCTA CGACGATGTG CTGCTGATGC AGGCCGAGGC TTACATCGAG
CTGGGACAGC AGGCATTGGC ATTGCCGCTC ATCAATCAGG TCCGCAGGCG CGCCGCGGCC
AGCACCGGGC GGTTGAAAAA GACGGATGGC AGCTTTGCTT CGAAATACAA TATCAAGGAA
TATGCCGCTT CCGGCTGGAC GCAGGATTAT GCGCGGAAAG CATTGCGCTG GGAAAGAAGG
CTTGAATTCG CGACGGAAAG CCCGCGCTTT TTCGACCTTG TGCGCTGGGG TGTCGCAGCG
GAAACTTTGA ATGCGTATCT TGAAAAAGAA AAAGTAAGAA GGCCGTTCCT GGCAACTGCG
AAATTCACTG CGGGAAGGGA TGAGTACCTG CCCATTCCGC AGCGGGAGAT CAGCTTTACG
AAAGGGCTTT ATGTTCAGAA TCCGGGTTAT TAA
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| Protein sequence | MKRKYIFGLM VSGTMLIGTS CNDFLDYQPE GLLSSENIKS ASAAESLVTA AYAGIGNDEM
IGPMTSMWVY GSVRSDDAYK GGGGVSDVAE VDFYEHYNLT RPDFGMMHPY TWENFYKAIS
RANAALNSLN GITEAEFPLR TTRMAEMRFL RGHSHFMLKM LFKNIPYIDE KLSSDDILKE
SNVRYNHDEL WNKIGEDFQF AVDNLPQKQA QVGRANKLSA AAYLAKLRLF QAYEQDANHQ
VTGINKNRLQ EVVTLTQQVI ASGQYSLQPD FAENFIAETE NGPESIFAIQ YSINDGTAAG
RLSYVTGLNY PHGAPQYGCC GFHQPSQNLA NAYRTDANGL PLFETFNDKN VDFANETVDP
RVDHTIGIDG HPYKYDATKP FSNAWVRDPG VYGFFHTMKE QQLATSPSYH KEGPFIGSSK
NIDIIRYDDV LLMQAEAYIE LGQQALALPL INQVRRRAAA STGRLKKTDG SFASKYNIKE
YAASGWTQDY ARKALRWERR LEFATESPRF FDLVRWGVAA ETLNAYLEKE KVRRPFLATA
KFTAGRDEYL PIPQREISFT KGLYVQNPGY
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