Gene Dfer_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1594 
Symbol 
ID8225165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1918404 
End bp1919864 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content57% 
IMG OID644929450 
Productprotein of unknown function DUF1501 
Protein accessionYP_003086002 
Protein GI255035381 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.200905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC CAATATTGGA TTACGGGATG AACACCACCC GCAGGCATTT TTTATCGAAA 
CTAAGTTTGG GCCTCGGCAG CGCCGCACTG GGTTCGCTGC TCATTCCCGA CCTGTTCAAA
GGAGGTGGCG GAGAAGCTGA CATGGAAGGG CTCATGGCCG GTCTGCCGCA TTTTGCCCCC
AAGGCTAAGC GGGTGATCTA TCTTTTTCAA AATGGCGCAC CATCGCAGCT CGACTTGTTT
GACTACAAGC CTATGCTGAA CAAAATGCAC GGCGAAGACC TTCCGGAATC CATTCGGGGA
ACACAGCGGC TCACCGGCAT GACGGCCAAC CAGGCGAAAT TCCCGCTGGC CGGTTCGATA
TTCAATTTCA AACAATACGG CAAAAGCGGC GCGTGGATGA GCGAGCTGCT CCCGCACACA
GCCGGCATTG TGGATGATCT TTGCATTATC AAAACACTCA ACACGGAGGC GATCAACCAC
GACCCGGCCC TGACTTTCTT CCAAACCGGC GCCCAGGTAG GCAACCGCCC GAGTTTCGGC
GCATGGCTCA GCTACGGCCT GGGAAGCGAA AACCAGAACC TGCCCGGCTT TTGCGTGCTG
CTCTCGCGCG GGAAAGGCAA CGGGCAAGGG GTGTATTCCA AATTATGGAC CAACGGCTTT
CTGGACTCCG TGCACCAGGG CGTGCAGTTC AGCAGCGGCG AAAACCCGGT TTTGTACCTC
AACGATCCCG ACGGTATGGA CCGCGCCCAG CGCCGCAAAA TGCTTGATAA ACTTTCGGAA
CTCAACCAGG GCACCTATAA TGAGTTCGGC GACCCGGAAA TAACGGCCAA AGTGCAGCAA
TATGAAATGG CTTTCCGTAT GCAGACCGCC GTTCCGGAAA TCACCGATAT GAGCAAGGAG
CCGGAATCAA TCGTGAAAAT GTATGGCCCC GAATGCCTCG TGCCGGGCAC CTACGCGGCC
AACTGTCTGC TGGCGCGGAA GCTCTCCGAG CAGGGCGTGC GTTTTGTGCA GTTGTACCAC
CAGGGATGGG ATAGCCACGG CGGCCTGCCG AGCGAGATCC GGGGACAATG CATGGACGTC
GACCAGGCGT CGGCGGCATT GGTAACCGAC CTCAAACAGC GCGGCCTGCT TGACGAAACG
CTCGTGATCT GGGGAGGAGA ATTCGGGCGC ACCAACTACT GCCAGGGCAC CCTCACCAAG
GATAATTACG GCCGCGACCA CCATCCGAGG GCATTTACCG TGTGGATGGC CGGCGGCGGC
GTGAAACCCG GCATTGTGTA CGGCGAAACC GATGAATTTG GCTATAACGT TGTCAAAGAT
CCTGTGCACG TGCATGATTT CCATGCGACA ATACTCAACC AGCTCGGGCT GGACCATGAA
AAACTCGTTT TCAAGCACCA GGGACGCCGC TACCGTCTCA CCGACGTGGC CGGTAAGCTG
GTAAAAGGGA TTATTGCTTA A
 
Protein sequence
MEKPILDYGM NTTRRHFLSK LSLGLGSAAL GSLLIPDLFK GGGGEADMEG LMAGLPHFAP 
KAKRVIYLFQ NGAPSQLDLF DYKPMLNKMH GEDLPESIRG TQRLTGMTAN QAKFPLAGSI
FNFKQYGKSG AWMSELLPHT AGIVDDLCII KTLNTEAINH DPALTFFQTG AQVGNRPSFG
AWLSYGLGSE NQNLPGFCVL LSRGKGNGQG VYSKLWTNGF LDSVHQGVQF SSGENPVLYL
NDPDGMDRAQ RRKMLDKLSE LNQGTYNEFG DPEITAKVQQ YEMAFRMQTA VPEITDMSKE
PESIVKMYGP ECLVPGTYAA NCLLARKLSE QGVRFVQLYH QGWDSHGGLP SEIRGQCMDV
DQASAALVTD LKQRGLLDET LVIWGGEFGR TNYCQGTLTK DNYGRDHHPR AFTVWMAGGG
VKPGIVYGET DEFGYNVVKD PVHVHDFHAT ILNQLGLDHE KLVFKHQGRR YRLTDVAGKL
VKGIIA