| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1588 |
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| Symbol | |
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| ID | 8225159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1908471 |
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| End bp | 1912790 |
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| Gene Length | 4320 bp |
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| Protein Length | 1439 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929444 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003085996 |
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| Protein GI | 255035375 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.418417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATA GAATCATTCT TTTTTCGATC CGCAATAAGC TGGTTGTGGG CATTTTTACG
CTCACGCTTA TTGTGTGGGG GCTATGGAGC GCGTCGAACC TGCCTGTCGA CGCCGTGCCC
GACATTACCA ATAACCAAGT ACAGGTTATC ACGCTCACGC CCACGCTGGC CGCTCAGGAA
ACCGAGCAGC TGGTCACCTA TCCCATCGAG CAAAGCCTGG CCAACCTGCC GGATCTGGTG
GAAATGCGGT CGATCTCCCG GTTTGGCCTG TCGGTAATCA CCGTCGTTTT TGAGGACGAT
ACGGACATTT ACTTCGCCCG CCAGCTCATT ACCGAGCGGC TCAAAGAAGC GGAGCAGAAC
ATTCCCAAAG GAATCGGGAC GCCCGAGCTG GCGCCGGTGA GCACGGGTTT GGGGGAAATA
TTTCAATATG TGATCCACCC TAAAAAAGGC GCCGAAAACA AGTATTCGGC CATGGAACTG
CGCACCATGC AGGACTGGAT CGTGGCCCGG CAGCTCTACG GTACGCGGGG TGTGGCCGAG
GTTAACAGTT TCGGCGGACT GCTCAAACAA TACGAGGTGG CGGTAAATCC GCAGAAACTG
AAAGGGATGA ACGTCACCAT CGCCGACATT TTTGAAGCGC TGGCCCAAAA CAACGAGAAT
ACCGGCGGCG CTTACATTGA TAAAATGCCG AATGCTTACT TCATCCGCGG CATCGGGCTC
GTGTCGTCGC TGGACGATAT CCGCGCCATC GTGGTGAAGA ATGTGAACGG CATTCCGGTG
CTGATCCGCG ATGTGGCCGA GGTGCGTTTA GGCCATGCCG TTCGGTATGG CTCGGTGACG
TACAATGGCG AAAAGGAAGT GGTAGGCGGC ATTGTGATGA TGCTCAAAGG CTCCAACAGC
GCGGCCGTGG TGGCGCGGGT GAAAGAGAAA ATGGAAACCA TCCGGAAATC GCTGCCTGCC
GACGTGGAAA TAGAAGCCTT TCTGGACCGT ACCGACCTGG TAAACAGAGC CATATCCACC
GTCCGCACCA ACCTGATCGA AGGCGCATTG ATCGTCATTT TTGTGCTGGT ACTGTTCCTG
GGTAACCTCC GCGCCGGGCT GATCGTGGCG TCGGCCATTC CGCTTGCAAT GCTTTTCGCG
CTGGGTATGA TGCACACTTT CGGCGTTTCG GCAAACCTGA TGAGCCTCGG CGCGATCGAT
TTCGGGCTGA TCGTCGACGG GGCGGTGATC ATTGTGGAAG CGGTACTCCA CCATCTGGCG
CTGCGCAAAA CCACCGGCAG GCTTACGCAG GACGAGATGG ACCAGGAGGT GTTTGAATCG
GCCTCCCGCA TCCGGAACAG CGCGGCGTTT GGGGAAATTA TTATCCTGAT CGTCTATATT
CCGATCCTTT CGCTAGTGGG TATCGAGGGT AAAATGTTCC GGCCGATGGC GCAGACGGTG
TCGTTTGCCA TCCTGGGCGC GCTCCTGCTG TCGCTTACCT ACATTCCGAT GATGGCCGCA
CTGGTGCTGC CGAAGACGGT TTCCGACAAA AAGACGCTTT CCGACAAAAT GATGGCGCAC
ATGCAGGCAC TCTACGCCCC TGTGCTTGCG TGGGCAATCC GGTTCAGGAT AGCGGTTATT
GCGGTGACCA TGGTCGTTTT TGGCGTGGCG GTATTGCTTT TTGTGAGAAT GGGCGGCGAA
TTCATCCCGC AACTCGAAGA AGGCGATTTT GCATTCCACT GCATTCTTCC GCAGGGCACA
TCGCTGTCGC AAAGCGTCGA AACGTCCATG CAGGCCAGCA GGATTATCCG CTCCTTCCCC
GAAGTGGCGA TGGTGGTGGG CAAAACGGGC AGTGCGGAAG TGCCGACGGA CCCCATGCCA
CCCGAAGCCA CGGACCTGAT CATTGTCCTC AAACCCCGAC GCGACTGGGC CACCTCCCAA
AGCTATCCGG AACTGGCCCG GAAAATGGAA GAAAAGCTCG AAACCATTCC GGGCGTATTC
TTTGAAGCTA ACCAGCCTAT TCAAATGCGG TTCAACGAGC TCATGACGGG CGTGCGGCAG
GACGTTGCCA TTAAGGTGTT CGGCGAGAAT ATCGATACCC TCGCCGCCAT TGCACCGCGG
GTGGCGCGCG TGGTGGAGTC GGTACGGGGC GCTACCAGCC CGCAAATGGA GCGCACAACC
GGCCTTCCGC AAATCACCAT CGAATACGAC CGTGCCAAAA TCGCTGCCTA TGGGATGAAT
ATCGCCGATA TTAACCGGAC GGTCCGCACG GCTTTTGCCG GGGAAGCGGC GGGCGTCGTG
TTTGAAAATG AACGCAAGTT CGATCTGGTC GTCCGCCTGG ATAGCGCCAA CCGCTCGTCG
ATCGACGATG TGAGCGACTT GTTCGTAGCT ATGGCCAACG GGACGCAGAT CCCGCTCTCG
CAGGTAGCGA CGGTAGCCTT TCGCGAAGGC CCGGCGCAAA TCAGCCGCGA GGATGGCAAA
CGCCGCATTG TGGTGGGTTT CAATGTGCGC GGCCGCGATG TGCAAAGCGT GGTGGAGGAA
ATCCAGGGCA AACTCGCCGC GGCAAAACTG CTGCCGACCG GCTACTATTA CATTTATGGA
GGAACTTTCG AAAACCTGCA AAAAGCCACG TCCCGACTGC TGATCGCCGT GCCGATTGCC
CTCCTACTGA TCCTCGTGCT GCTCTATTTC ACATTTGGCT CTTTCGCGGA AGCATTGCTC
ATTTTCACCG CCATTCCGAT GAGCGCCATC GGAGGAGTGT TTGCATTGCT GCTGCGCGGT
ATGCCGTTCA GCATTTCGGC CGGCGTGGGT TTCATCGCGC TGTCGGGAGT GGCCGTGCTG
AATGGCATTG TACTCGTCAG CACGTTCAAC CAGTTGAAAA AAAGCGGGTT TGACCAACTG
ACACCGCGCA TTGTGGAGGG TACTAAAATA CGGCTGCGGC CGGTGTTGAT GACCGCGACG
GTAGCGTCGC TGGGCTTTCT GCCCATGGCC CTCTCCCACG GGGCCGGCGC CGAGGTGCAG
AAACCACTCG CCACCGTGGT GATCGGCGGG CTCGTCACCG CCACTTTTCT GACGCTCGTG
GTGCTTCCAT TACTGTACTT ATGGTTGGAA AAACGCCACG GAAATGCATT CAAAACCCTG
GCTATAATCG GCTTACTGGT TGCTGCATCC GGCCAGGCCT CGGCGCAGGA CAGCCCGCCC
GCCGTAAGGG TGAAGATCGG GCAGCTTCTC GAAGCCAGCA ATGCCAACCT CGAACTGGAA
GTGAACCGGA AGGCCATCAG ACGGGACGAA CACCAGGTCC GCGCGGCCGG GATCATTCCC
AAAACGGGCG TATTCGCTGA AAACGAGGAC CTTCGGCCCA CCGATAGCCG AGGCATCCTC
AAAATCGGCA TTTCACAGAG CATTCCCTGG CCTGGGCTTT ACAAGGCGCA GAAAAGCCGC
TACAAGCACC AGCTCGAAGC CACAAAGGCG AGCGGCACGC TCATCGCAAC GAACATCAGA
CGAGATGTAC GATTGGTATA TTACCAGCTC TGGTATTTGC AGGACAAAGG CCGCCTCCTC
CGAAGCCTGG ACAGCATCTA CATAACCCTC AACCAGACAA CCGCGCTCAG GGTACGCACC
GGCGACACGC CCGGCCTGGA CAGCATCGCA TCCACCGCCC GTTCGCGCGA GCTGAGGGCG
CTTATTTCCC AAAATGCGAA CGAAATGCAG ATCCAGCAGC GGCTGCTGAT GCAGCTGCTG
AATGCAGAAG GCCGATATCT CCCGCCGGAC AGCGCATTGG AAAAACTGCC GCTGCCCGAC
AGCATCCTGC ACCATCCCCA CCCGGCTGTG GAGGTCCAGC AACGGAACGT CGACATTGCC
CGCGCGGGCA TAGCCGTGGC CCGCAACGAA AACCGCCCCG ACTTCTCGGG AAGGTTCTTC
TCGCAGCGCC TGTACGGGCT CAGCGACCCA TTCACGGGCT TTTCCGTAAC TGCCGCGTTC
CCGATCCTCG GCTCTGGCTC GTACCGAAGC CGCGTAAAGG CAGCCACCGC GGATGCCGAC
CTGCAACAGA GCCAGCTTGC GTACAGTGAG CAGGTGTACC AGACCGGCCA GGCGCAGGCG
CGGCAGGAGG TCGGGAAAAA CAGCGCGCTA CTGGCATACT ATGAAAGTAC CGGGCTCGCG
CAGGCTTCCG AGATCATCCG GTCGGCTACG CTCGCTTACG GGCAGGGCGA GATCAGTTTT
GCGGAGCTTT CACAGTTTCT GGCGCAGGCA GTCGACATCC GGCGCAACCA CCTCGAAAGT
TTGCACGCGT ACAACCAGTC CGTGATCCAG TTGTATTATT TCATCAATCC AACCCAATGA
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| Protein sequence | MLDRIILFSI RNKLVVGIFT LTLIVWGLWS ASNLPVDAVP DITNNQVQVI TLTPTLAAQE
TEQLVTYPIE QSLANLPDLV EMRSISRFGL SVITVVFEDD TDIYFARQLI TERLKEAEQN
IPKGIGTPEL APVSTGLGEI FQYVIHPKKG AENKYSAMEL RTMQDWIVAR QLYGTRGVAE
VNSFGGLLKQ YEVAVNPQKL KGMNVTIADI FEALAQNNEN TGGAYIDKMP NAYFIRGIGL
VSSLDDIRAI VVKNVNGIPV LIRDVAEVRL GHAVRYGSVT YNGEKEVVGG IVMMLKGSNS
AAVVARVKEK METIRKSLPA DVEIEAFLDR TDLVNRAIST VRTNLIEGAL IVIFVLVLFL
GNLRAGLIVA SAIPLAMLFA LGMMHTFGVS ANLMSLGAID FGLIVDGAVI IVEAVLHHLA
LRKTTGRLTQ DEMDQEVFES ASRIRNSAAF GEIIILIVYI PILSLVGIEG KMFRPMAQTV
SFAILGALLL SLTYIPMMAA LVLPKTVSDK KTLSDKMMAH MQALYAPVLA WAIRFRIAVI
AVTMVVFGVA VLLFVRMGGE FIPQLEEGDF AFHCILPQGT SLSQSVETSM QASRIIRSFP
EVAMVVGKTG SAEVPTDPMP PEATDLIIVL KPRRDWATSQ SYPELARKME EKLETIPGVF
FEANQPIQMR FNELMTGVRQ DVAIKVFGEN IDTLAAIAPR VARVVESVRG ATSPQMERTT
GLPQITIEYD RAKIAAYGMN IADINRTVRT AFAGEAAGVV FENERKFDLV VRLDSANRSS
IDDVSDLFVA MANGTQIPLS QVATVAFREG PAQISREDGK RRIVVGFNVR GRDVQSVVEE
IQGKLAAAKL LPTGYYYIYG GTFENLQKAT SRLLIAVPIA LLLILVLLYF TFGSFAEALL
IFTAIPMSAI GGVFALLLRG MPFSISAGVG FIALSGVAVL NGIVLVSTFN QLKKSGFDQL
TPRIVEGTKI RLRPVLMTAT VASLGFLPMA LSHGAGAEVQ KPLATVVIGG LVTATFLTLV
VLPLLYLWLE KRHGNAFKTL AIIGLLVAAS GQASAQDSPP AVRVKIGQLL EASNANLELE
VNRKAIRRDE HQVRAAGIIP KTGVFAENED LRPTDSRGIL KIGISQSIPW PGLYKAQKSR
YKHQLEATKA SGTLIATNIR RDVRLVYYQL WYLQDKGRLL RSLDSIYITL NQTTALRVRT
GDTPGLDSIA STARSRELRA LISQNANEMQ IQQRLLMQLL NAEGRYLPPD SALEKLPLPD
SILHHPHPAV EVQQRNVDIA RAGIAVARNE NRPDFSGRFF SQRLYGLSDP FTGFSVTAAF
PILGSGSYRS RVKAATADAD LQQSQLAYSE QVYQTGQAQA RQEVGKNSAL LAYYESTGLA
QASEIIRSAT LAYGQGEISF AELSQFLAQA VDIRRNHLES LHAYNQSVIQ LYYFINPTQ
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