| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1583 |
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| Symbol | |
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| ID | 8225154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1900926 |
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| End bp | 1902365 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929439 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085991 |
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| Protein GI | 255035370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00621618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.437007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA ATACCATCAT ACTTGGCTCA ATGTGCGTGC TCACCACGGG CTGCTCGGGC
TTTCTCGACC TGGCGCCGAT AGACGCCGCT AACGTGAAAA ACTTCTACCG CAATGCGTCC
GATATGCAGG CGGCGGTGAC CGCGGCTTAT GGCATGCTCG CCAACTTCGG CCAATACGGC
TACGCCTATT ATAATATCGC CGAGGCACGG TCCGACAACA CCACGAACTG GGAAGGCGGC
GGCAACCTGC CCGATGCCGA GCTCGACCAG TTCAAAATGG CGTCCACGAA CGAGATCATC
CGCGTGATGT GGGTGGATAC CTACCGGGGA ATACTCGCCG CCAACACCGT GCTCGACCAT
ATCGGCGGCG CTCAAATGGA CGACGCCCTG CGCCAGCGCT TTATCGGCGA GGCCCGTTTT
CTGCGTGCTT TGCAGTACTT TAATCTTGTG CGGACGTTCG GCGACGTGCC GCTGGTTTTG
TCGGAAACCA AAACCGTGGA CGAAGGCTAC TCGCACGCTC GGGTGCCGAA AGCGGAAGTA
TATGCGCAGA TCGTCGCCGA TTTGACCGAC GCAGAGCAGA AACTGCCAGT TTCTTACACC
GGCAGCGACA TAGGACGCGC CACGCGCGAC GCCGCAAAAG CATTGCTTGG AAAAGTATAC
CTCACCACCG GCGATTTTGC CAAAGCGAAA GACAAACTGA AAGAGGTGAT CGACGGGGGG
CATTACAAGC TGCTCGACGA CTATGCGGCA TTATGGCCGG TCGCTAATGC AAACAATGCA
GAATCCCTGT TTGAGGTGCA GTTCAAAAAA GGCGGTACGG GCACGGGCAG CAGCTTTTAC
AGCAACTTTG CTCCGCGTAA CTCGGGATCA TCCGTGGTTA AAGTCGGCTT TGCCGGCGGG
CGGAACCTCC CCACCACCGA CCTCATTGCC GCTTACGAGC CGGGCGATTA CCGCAAAGGC
GTTTCACTTG CGCTGGGCTA TACCGATAAT GTCACCGGCA AATTCGTGGC GGATCCGTAT
TCGCTTAAAT TTCAGGATGA TGCATTCACG GATGGTGATG CCGATAACAA CTGGCCGGTG
CTGCGGTATG CCGATGTGTT GCTGATGTAT GCAGAGGCAG TGAACGAAGT GAGCGGCCCG
GTGACGGAAG CCTACGACGC CATCAATGCC GTACGCAAGC GGGCGAAGCT GGCTGCCCTG
CCGGCGGGCC TGTCCAAAGC GGCATTCAAG CTGGCGATTG AGCATGAGCG GCAGGTGGAA
CTGGCATTTG AAGGCCACCG CTGGTTTGAC CTCGTGCGTA CCGGACGGGA AGTAGCCGTG
ATGAATGCGC ATTTCAAAGC GCCTGTCGTG CAGGAGTTTA ACGCCGTATA TCCCATTCCA
CAAACGCAGA TCGACATCAA TCCGGAAGGT ATCCGACAAA ACCCGGGCTA TAATTTCTGA
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| Protein sequence | MKLNTIILGS MCVLTTGCSG FLDLAPIDAA NVKNFYRNAS DMQAAVTAAY GMLANFGQYG
YAYYNIAEAR SDNTTNWEGG GNLPDAELDQ FKMASTNEII RVMWVDTYRG ILAANTVLDH
IGGAQMDDAL RQRFIGEARF LRALQYFNLV RTFGDVPLVL SETKTVDEGY SHARVPKAEV
YAQIVADLTD AEQKLPVSYT GSDIGRATRD AAKALLGKVY LTTGDFAKAK DKLKEVIDGG
HYKLLDDYAA LWPVANANNA ESLFEVQFKK GGTGTGSSFY SNFAPRNSGS SVVKVGFAGG
RNLPTTDLIA AYEPGDYRKG VSLALGYTDN VTGKFVADPY SLKFQDDAFT DGDADNNWPV
LRYADVLLMY AEAVNEVSGP VTEAYDAINA VRKRAKLAAL PAGLSKAAFK LAIEHERQVE
LAFEGHRWFD LVRTGREVAV MNAHFKAPVV QEFNAVYPIP QTQIDINPEG IRQNPGYNF
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