| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1573 |
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| Symbol | |
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| ID | 8225144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1884115 |
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| End bp | 1887240 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929430 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003085982 |
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| Protein GI | 255035361 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.885203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACAG CCGCCGGCGC ATTCGCGCAG TCGGAAGCTA AAAGAGTAAT TACCGGTACA
GTCGTAGCCC TCGACCAGGG CGACGGCATC CCGGGTGCGA GCGTGGTTGT GAAGGGTACC
TCCAACGGCA CCACGACCAA CACCAACGGA GAGTTCTCGA TCGAGGCGTC TTCGGGTACT
ACGCTCGTTT TCTCGTTCAT CGGGTACGAG ACGCAGGAAG TGGCAGTGGG AAACAAAACC
CGCATCGACG TTAAACTGAA AGAAAGCATT TCGGCATTGG ACGAGGTGGT GGTAGTCGGC
TACGGGGAAA TGAAGAAGAC CGACGTGTCC AGCTCCCAGG TGACCGTCTC CGGCAAGGAT
TTAAGTAAAA CCATCAACAC CTCGCTCGAA CAGGGCTTGC AGGGCCGCGC GGCCAACGTA
ATGGTGCAGC AAAACTCCGG CCAGCCGGGT GCGGCACCGT CGGTACTGAT ACGCGGTTTG
AGCTCCCTCA CGGGCACCAC GCAGCCATTG TACGTGATCG ACGGCGTGCA GATTAAGCCG
GACAACATGC GCGACGACCC TAACAACCGT CCGACCGGCT TCTCGAACAT CCTGTCGAGC
ATTAACCCGG ACGATATCGA GACGATCAAC GTATTGCAGG GCCCTTCTGC CACAGCGATC
TACGGTGCAG TGGGTGCCAA CGGCGTCGTG ATGATCACCA CCAAGCGCGG TAAGGCGGGC
GAAGCGAAGA TCACATTCAA CTCGCTCATT ACGTTGCAGG CTGAGCCTAA GCATATTGAT
GTAATGAACC TGCGCGAATA TGCGCAGTTC CGTAACGAAG CGGCTGCGGT GGGCAGCACG
GCTACGGAGC CGCAGTTTGC CGATCCGTCG GTGCTCGGCG AGGGTACCGA CTGGCAAAGC
GCGCTTTTCC GCCCGACGAC CCTCCAAAAA TATTCGCTCG GCCTCAGCGG CGGTACCGAA
AAATCGACCT ACTATCTGTC GGGAGAGTAT TTCAACCAGA AGGGGATTGT GGAAGGATCG
GGTTTCAAAC GTTATAATGG CCGTTTGAAC CTGGAAAACC AGACCCGCAG CTGGCTGAAA
ATCGGTGCGA ACATGAGCGT GGGTATCACG GAAGAAAAGG TGAATACAAA CAATGGCGGC
ATTATCCAGC TCGCATTGGA CCAAAACCCG AGCGTACCGG TAACCAACCC CGACGGCAGT
TGGGGCGGAC CTACATCGAC GCAATTCCAG TTCACAAACC CGGTGATGAT CTCGAAGATC
TACAACGATT ACAACCGCCG TACTTCCATC CTGGGAAGCC TTTTTGCGGA TGTGAAACTG
GCTAAGAACC TCACCTGGCA CACGGAAGCG AACGGCAGCG CCGAATTTTT GAAATACTAC
TCATTCCACC CGTCGTATAC CATCGGAGGT TTCGTGGTGT CGCAGGACGC GGCTACTTCC
ACCCGCTCGG TAAATACCAA TACCTGGTGG AGCTTGCACA GCCGGTTGAC CTACGACCTC
AAACTTGGTC GCCACGGCGT GAACATCATG GCTGGTCACG AGGCACAGGA GTATACCTAC
GAGTCGCTGA CCGGTACGCG CAAGAAATTC ATTACCAATA CCATAGAAGA GCTTTCGGGC
GGTGATGCTT CCGTGATTTC GAATGTAAGC AACAACAGCG GCAAAGGTGC CGGCTCGCGC
GAATCGTATT TTGCCCGTGT GAATTACAGC TTCAACGAGC GCTATTTCTT GCAGGGAACT
TACCGGATGG ACGGCTCCTC TGCATTCCGC GAAGGTCGTC GCTGGGGCAA CTTCCCGGCG
GTATCGGTAG CATGGCGCGT TTCGGAAGAG CCTTTCCTGA AAAGTGTGAA GGAAATCAAC
GACCTGAAAC TGCGGTTTGA GATCGGTCGC TCGGGTAACC AGGGCAGCGG CGGTAATGCG
ATCTTCTCGA CGCTTCAAAC CGTGCCGACA GGCTGGGGAA CGGGCTTTTT GGCTTCCAAT
TTCGCCAATG AGTTCCTTAC ATGGGAAAAG GACGACGTGA TCAACGGAGG ACTTGACCTG
CATATGTTCG GCAACCGGGT GGAGCTGATT GTGGATGCGT ATATCAAAAA CATTACCAGC
CTCATTACCG TAAACTCCTA TCCATTCACT TACGGCGGCG ATATCGCTTA CTCACCCGGC
TACCTGAGCT GGCCGGCAGT GAATGCGGGT TCGATGAAAA ACCGCGGTAT TGGTTTTACA
TTAAATACCG TGAATATCGA CAAAGGCGGT TTTTACTGGA AAACAGGACT TAACCTGTCG
TTTGACCGCA ACAAAGTGAC CTCGCTCCTG AACCCGATCA CGCCGATCTG GAATGCGACT
TCGGTAGGTT TCAAAACGGA GGTAGGACAG CCTGCGAGCA TGATCACCGG CTATATCGCC
GACGGCCTCT TCCAGGACGC GAATGATATC GAAGGCCACG CGGTTCAGAC TTCGAACGGC
CAGCTGACGA TCAATCCGGC CACAGGTAGC TGGGTAGGGG ACACCAAGTT CCGCGACCTG
AACAACGACG GCGTGATCGA CGCCGAGGAC CGCACCGTGA TCGGTAACCC CTGGCCGAAG
TTCACCCTCG GGTTCAACAA CAACATGACT TATAAGAATT TCGAACTGAA TGCATTCCTC
ACCGGAAGTT TCAAGAACGA CATTCTCAAC TATCCGCGCT ACCGCGCCGA GATCCCCGGC
AATGGCGGCG TGTTCGGCAA CCAGTGGAAA TCGGTAGCCA ACTACGCGAG ACCAAGCAGC
TACGATGTTG CTGATGCGGA ATCGGTTACG CTCACCAACC CAGGCCACAC CATCCCACGC
ATCGCTCCGG GCGATCCGAA CGGCAACAAC CGTATGAACA CCAACTTCAT CGAAGATGGC
AGCTACGTAC GTTTGAAAAA CATCACGATC AGCTACAACT TCCCGAAATC GATGTTGAAA
GACTTCTTTA TCAGAGGCTT GCGGGCTTCG GTAGGCGCGC AAAACCTGTT CACGATCACG
AAGTACAAAG GCTACGATCC GGAGATCGGT ATGGTGAACT ATGGCGGTAC GGTCATGGCA
GGCATCGATA CAGGCCGCTA CCCGTCGGTT CGCATGTATT CATTCGGCTT GCTGGCTGAT
TTCTAA
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| Protein sequence | MGTAAGAFAQ SEAKRVITGT VVALDQGDGI PGASVVVKGT SNGTTTNTNG EFSIEASSGT
TLVFSFIGYE TQEVAVGNKT RIDVKLKESI SALDEVVVVG YGEMKKTDVS SSQVTVSGKD
LSKTINTSLE QGLQGRAANV MVQQNSGQPG AAPSVLIRGL SSLTGTTQPL YVIDGVQIKP
DNMRDDPNNR PTGFSNILSS INPDDIETIN VLQGPSATAI YGAVGANGVV MITTKRGKAG
EAKITFNSLI TLQAEPKHID VMNLREYAQF RNEAAAVGST ATEPQFADPS VLGEGTDWQS
ALFRPTTLQK YSLGLSGGTE KSTYYLSGEY FNQKGIVEGS GFKRYNGRLN LENQTRSWLK
IGANMSVGIT EEKVNTNNGG IIQLALDQNP SVPVTNPDGS WGGPTSTQFQ FTNPVMISKI
YNDYNRRTSI LGSLFADVKL AKNLTWHTEA NGSAEFLKYY SFHPSYTIGG FVVSQDAATS
TRSVNTNTWW SLHSRLTYDL KLGRHGVNIM AGHEAQEYTY ESLTGTRKKF ITNTIEELSG
GDASVISNVS NNSGKGAGSR ESYFARVNYS FNERYFLQGT YRMDGSSAFR EGRRWGNFPA
VSVAWRVSEE PFLKSVKEIN DLKLRFEIGR SGNQGSGGNA IFSTLQTVPT GWGTGFLASN
FANEFLTWEK DDVINGGLDL HMFGNRVELI VDAYIKNITS LITVNSYPFT YGGDIAYSPG
YLSWPAVNAG SMKNRGIGFT LNTVNIDKGG FYWKTGLNLS FDRNKVTSLL NPITPIWNAT
SVGFKTEVGQ PASMITGYIA DGLFQDANDI EGHAVQTSNG QLTINPATGS WVGDTKFRDL
NNDGVIDAED RTVIGNPWPK FTLGFNNNMT YKNFELNAFL TGSFKNDILN YPRYRAEIPG
NGGVFGNQWK SVANYARPSS YDVADAESVT LTNPGHTIPR IAPGDPNGNN RMNTNFIEDG
SYVRLKNITI SYNFPKSMLK DFFIRGLRAS VGAQNLFTIT KYKGYDPEIG MVNYGGTVMA
GIDTGRYPSV RMYSFGLLAD F
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