Gene Dfer_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1570 
Symbol 
ID8225141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1879361 
End bp1881259 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content57% 
IMG OID644929427 
Producthypothetical protein 
Protein accessionYP_003085979 
Protein GI255035358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.475185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.622551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA ATGCATTATC CGCCATCGGC AGGGCACTCA TCGTAGTTTG GATGGGGGCA 
ATGCCGGTGG TCGGGCAAAT ACAGGTGACG ATCGACGCCG GAGCTGACTT GAAGCCTGTT
TCGCCGTACC TCTACGGCCG TAACAACTCA TTCTCCTCCA CCGATCCGAA CTGGACATTA
CCCGATGCCG ACCTGGTGCG GCTCCGCGAT GCGGGCGTGA CCTTCTTCCG GGAAAGCGGC
GGCAATAATT CAAGCAAGTA CAACTGGCGA AGAAAGCTCG GCAGCCATCC CGACTGGTAC
AACAACGTTT ACGTCAACAA CTGGGACCAC GCCGCACAGA CCCTGCAAAA GCACTTTCCT
GCCGCGCAGG GTATGTGGGC GTTTCAGTTG CTGGGCTATG CGGCCAGGAG CAATGCCGCC
AATTTCCCGG ATTGGGACTA CAACCGCTCC CAGTGGTGGG AAGGTGTGAA CCAGAACCTG
GCCGGCGGCG GCGTGCCCAA TGCCACCGGT ACCAAAGCCC TCACCGAAGG GAACCCCCAC
CTTTACCTGG AAAAATGGCC CGCCGACTCT TCGGTTGCCA TGCTCGACCA TTGGTTCGGT
GCAAACGGCA TTGGCCTGAA AAAGGAGGGC ATTCGCTACT GGAATATGGA CAACGAGCCG
GAAATATGGT CGGGCACGCA CGACGACGTG ATGCCCGTGC TGCTCAGCCC GCAGGAGTTC
ATGCAGCGGT ACATCCAACT GGCCAAAAAG GCGCGGGCTA AATTCCCGGA CATCAAGCTC
GTGGGCCCGG TAACGGCCAA TGAATGGCAA TGGTACAACT GGGGCACGCG GCCGGTGACC
GAAAACGGTA AAACTTACCC CTGGCTGGAA TATTTTATCA AAACCATTGC CGCCGGGCAG
CAGCAAAGCG GAATCAGGCT GCTGGACGTG CTCGATATCC ATTTTTATCC ATCCACCCAA
AAAACAGAGG AAGTCGTGCA ACTCCACCGG GTGTTCTTCG ACCGGAATTA CGATTTTCCC
GAAGCAAACG GCGTGAAAAC CATGAACGGC GGCTACGACA ACAGCCTCAC CCGCGAATAC
ATTTTTGCCC GCTGCAACGA CTGGCTCACC CAATACCTCG GCGCGGACCA CGGCGTTACG
CTAGGACTCA CCGAAGCAGG CATTCACGAC GCCGTGCAGC CGTCCGTCAG GGCGGTGTGG
TATGCCTCCA CGCTCGGGGA GTTTATGAAA AACAATGTGG AGATTTTCAC TCCGTGGACC
TGGCAAACCG GCATGTGGGA AACCTTGCAT TTGTTTAGCC GCTATAACCT TACCCATTCT
GTGAGGGGGA TTTCGGCGAA CGAGGCGCTG GTATCGGCGT ATCCGACTGT AAATGCTTCG
AAAGATTCGA TGACGGTGGT GCTCATTAAC CGCTCTCCCG ACGCAAGCCA GGTGGTGAAT
GTGCGCTTCA ACCAGTTTTC GCCGGAGCCG GGGAAAGCGG TGCTGTACAA ATTATCACAG
CTGCCGGCGG AGGAAACGTT TGTTTCCCAT CGTGATAATG CATTGAAGAA ATCGGAGGTC
AATGTCGGCG TCAATGGGTT CGGCATCTCG CTGCCGCCCA TGTCGGTTTC CAGCGTCACA
CTCCGCAATG GCGGCCCGGT GCTTGGCGAA CCGCCTGCGG CGGAGCCGTT CCAGGTATTC
CCTAATCCTT CTTGGGACAG CGTCACCGTG CGCTGGGCCC ATCAGGATTT CGACCAAATT
ACCATTACAG CCACTTCCGG AAAGCAGATT TACAACCGTA CGCTGCAAAA ATCGCAGCGC
GAAGCGGTGA TCGGCCGGAA GTTACCGGCA GGCGTTTACC TCATCCGGCT CACCGGGCCG
GGCGGGCAAT CGGCTGTCAG AAAAATCATC GCCCGCTAG
 
Protein sequence
MPNNALSAIG RALIVVWMGA MPVVGQIQVT IDAGADLKPV SPYLYGRNNS FSSTDPNWTL 
PDADLVRLRD AGVTFFRESG GNNSSKYNWR RKLGSHPDWY NNVYVNNWDH AAQTLQKHFP
AAQGMWAFQL LGYAARSNAA NFPDWDYNRS QWWEGVNQNL AGGGVPNATG TKALTEGNPH
LYLEKWPADS SVAMLDHWFG ANGIGLKKEG IRYWNMDNEP EIWSGTHDDV MPVLLSPQEF
MQRYIQLAKK ARAKFPDIKL VGPVTANEWQ WYNWGTRPVT ENGKTYPWLE YFIKTIAAGQ
QQSGIRLLDV LDIHFYPSTQ KTEEVVQLHR VFFDRNYDFP EANGVKTMNG GYDNSLTREY
IFARCNDWLT QYLGADHGVT LGLTEAGIHD AVQPSVRAVW YASTLGEFMK NNVEIFTPWT
WQTGMWETLH LFSRYNLTHS VRGISANEAL VSAYPTVNAS KDSMTVVLIN RSPDASQVVN
VRFNQFSPEP GKAVLYKLSQ LPAEETFVSH RDNALKKSEV NVGVNGFGIS LPPMSVSSVT
LRNGGPVLGE PPAAEPFQVF PNPSWDSVTV RWAHQDFDQI TITATSGKQI YNRTLQKSQR
EAVIGRKLPA GVYLIRLTGP GGQSAVRKII AR