| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1565 |
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| Symbol | |
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| ID | 8225136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1870835 |
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| End bp | 1874263 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929422 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085974 |
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| Protein GI | 255035353 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGT TACAACAATT CCTCCTAATG ATTGTCATCA CCCAGCTGGC AATGGCCGGA
CCGTCGTCGG GCCAGAACCT GCTGGAAAGA AGGGTTACGC TCAATCTGAA CCGCACTACG
CTGGGCAGCG CGTTACAGCA GCTGGAAAAA ACAGCCGAGA TTAAATTTTC CTACAACTCG
CGCATGCTGC CGCTGAAATT TACAGTGAGC CTCAATGCGC AGAACGAGCC GCTCGCAACC
GTGCTCGACA AGCTGCTGCT GCCCAACAAG ATCAGCTACA AGCAGGTAAG CAACCGCATT
GTCCTCCGCA GCCAGCCCGA GGTGATCAAT GCCGCCGAAC CGGCACCCGA GGGCCCGAAG
TACGCAACGG TGGTAGACGA CCGCTCGCTG GTGGGGAAGG TGTCCGGCGA TAACGGCGAA
GGCTTGCCGG GCGTCAATAT CGTGATCAAA GGCAGCCAGC GCGGGGCCGT CACCAATGCA
GACGGTAGTT ACAGCCTCCT CGTACCCGAG GGCAGCCAAA CGGTCGTGTT TTCGTCGGTA
GGGTATATTT CGCAGGAAAT CGTCGTCGCG ACCGACCGTA CCGCGCTGGA CGTGACCCTG
AAAGTGGATG AAAAAGCCCT GGAAGAGGTG GTTGTGGTGG GCTATGGTAC CCAAAAGAAA
GTGAACCTTA CCGGCTCGGT ATCCACGGTG AATGTGGACA ATATGCAAAG CCGCCAGGTG
AGCAACAGCC TTGCCGCATT GCAGGGACAG GTGACGGGAC TTCGCATCAG CCAGGGTACT
GGTATGCCCG GCCGTGAAAG CGTGTCGCTC ACCCTCCGCG GGGCCAGCTC ATGGGGTACC
AACACCAGTC CGCTGGTGCT GGTAGACGGT GTCGTAGGCT CGCTGGACGT GCTTCCGATG
TCGGATATTG AAAGCATTTC AGTGCTGAAA GATGCGGCGT CCGCTTCCAT TTACGGCGCG
CGCGCTGCCA ATGGCGTAAT CCTCGTGACT ACCAAGCAGG GCAAAAAGGG CAAGCCGACA
TTGACCTACA ATATGTCGCT CCGCACGCAG TCACCCACCG GCGTGCCGAA TCAGATCTGG
AATTCGGGGC AATACATGGA GCTTTTCAAC AAAGCGGTTG CCCGGAATGC CGTGAGCGCG
GTGCCGTTCC CGCAGGCGCT GATCGACAAG TACACCGATC CCAACCGGAA CAAGGACCAG
TTTCCCGACT ACAACTGGGC CGATGCCGTC TGGAAATCGG CACCAATGCA GGAGCACAAT
GTGGGCGTAA ATGGTGGTTC CGATGCATTT AAATACAATA TATCCGCCGG CATGATCGAC
CAGAAAGGGG TGCTGCTGGG GCACAGGTAC AAGCGTTTCA ATGGTTTGGC CAACCTTTCG
ACCACGATCA ACAAATACAT TACAGTGGGT ACGAACGTGA GCTACATGAA AGGCAATTCG
CTTTCGCCCT ACTACGAAAA TCAGAACTTC GTGCTCATGA CGATGACCCA GTCGCCGCTC
GTGAAGCCGT ACCTGCCCGA CGGAAGCGGC CGGTATACCG ACAAGGCCGT GCCCACCGGC
GTAGGCGGTT CGCAGAACAA CCGCAACCCG TTCTGGATCG CTAACGAAAC GTATAGGGAT
TACGACGACT GGCAGGCCAA CGTGCAGGGC TGGCTCGATG TGAACTTCCT GCAAACCGAA
AAAATGGGAC TTAAATGGAG CTCCAAATAT GCCTCCCGGT TTGCCGAGCA GTTCCGCAAC
ATTTACCATT ACGGCGCCGA CGCTTTTTAT TATCTGCCTG AAAACGAGTA CACTGCCGGC
GGAGCCAATG TGTACCAGAA AGGTACGCCG TTCGGGCCAG AGGCATTGGG CGTAAACCAG
GGCAACTTCC GCACGCTGCT CAATACGTTT TACTCGTCGC TGAACTGGAA CTGGAATCCC
GGCCGGCATG ACATCGCATT GATGGTCGGA TACAGCCAGG AGGAGCAGAA ATACCGCTGG
CTGGGCGGCA CGCGCAATGT GTTTCCAGTC AAAAATATGT ACGAGCTCGA TGGAATGGGA
CCATTAAACC AGACTACCAC CGGCGGGCTC ACCGAATGGG CGTTCCAATC GCTTTTCGGC
CGGGCTACGT ATGCATTGGC TTCGAAATAC CTGTTGGAAG CGAATTTCCG GTATGACGGC
ACATCCCGCA TTTACAAAGA CAGCCGCTGG GGCTTTTTCC CGTCCGCGTC GGCCGGGTGG
CGGATCAGCG AAGAGGCATT TATCCGTGAC GGGGCAAGCT GGATCGACAA CCTGAAATTG
CGGGCTTCGT ACGGGCTGCT CGGTAATGCC AACATCGGTG AATACCGGGT AGGCAATACA
AACCTCGGTG AATATCCCTG GCAGGATACT TATGTCGCCA CGACCTATGC TTTCAACGAA
GCGCTGGGGC AGGGTGTTCA GCAAACCGCA TTCCGCAACA GGGGACTTAA ATGGGAAAAA
ACGACTATTG CCGACATCGG CCTCGATTTT AACCTGAAAA GCGACCTGAT TTACGGTACG
ATAGATTGGT ACAACAAGGT AACTACCGGA ATCCTGGCCG GCGCCATCAT CCCCGCCAGC
GCAGGCATGT CGGCGCCGGT GATCAACTAC GGCACGCTCA GAAACTACGG CCTGGAACTG
GAATTGGGAC ACAAAGGCAA ATTTGGGCAG GTTGAATACG GCATTAATGG GCAAGTATCC
GTTAACCGCA ACAAGGTCAT CAAATTCCCC GCCCCCGCTT ACAGCGACCG TATCATCATG
GAAGGGCTGC CGTACCGCGA CTATTACTTG TACGAATACA CCGGCCTGTT CAAATCGGAG
GAGGAGCTGA AAGCCGTGGT GACACCCGGT AACCCACAGC TCGGCGACAT TAAATTCAAA
GACCAGAACA ACGATGGCAA GATCGACGGC GACGACCGCA TTCGCGTGAA GGGCGCATAT
CCGGGCTTCA TCTACTCTTT CGGAGGCAAT GTGCGGTGGA AAAACTTTGA CCTGGCGCTG
TTCTTCCAGG GTGTGCAGGG GCAAAAAGTG AGAACATTTT TCTTTGGCGA AGATCCATTC
TCGCAGGGCT CATCCCCGCA TCCCAAGTTC CTCGACGCCT ACGATCCCGT GACCAACCCC
GACTCCGAAG TGCCGGCCAT TTACGGCTGG GGATATGCTC CGATGACCGG CGGAACGGCC
CAGAACTCGA CTTATTTCCT CAAAGACGCG TCCTACCTGC GCCTGAAAAA CGTGCAGATC
GGCTACACCA TACCGACTTC CGTCACCAAA AAAGTGGGTA TCAATCATCT CAAAGTGTTC
GTCACGGGAG ATAACATCCT CACATTCACC AAATACCCCG ACCTCGATCC CGAACGTGCG
GGCGACGGCT GGCATGCGCA GTACCCGCAG CTGAAAGTGT ATTCCGTGGG TTTGAACCTG
AGATTCTGA
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| Protein sequence | MKSLQQFLLM IVITQLAMAG PSSGQNLLER RVTLNLNRTT LGSALQQLEK TAEIKFSYNS
RMLPLKFTVS LNAQNEPLAT VLDKLLLPNK ISYKQVSNRI VLRSQPEVIN AAEPAPEGPK
YATVVDDRSL VGKVSGDNGE GLPGVNIVIK GSQRGAVTNA DGSYSLLVPE GSQTVVFSSV
GYISQEIVVA TDRTALDVTL KVDEKALEEV VVVGYGTQKK VNLTGSVSTV NVDNMQSRQV
SNSLAALQGQ VTGLRISQGT GMPGRESVSL TLRGASSWGT NTSPLVLVDG VVGSLDVLPM
SDIESISVLK DAASASIYGA RAANGVILVT TKQGKKGKPT LTYNMSLRTQ SPTGVPNQIW
NSGQYMELFN KAVARNAVSA VPFPQALIDK YTDPNRNKDQ FPDYNWADAV WKSAPMQEHN
VGVNGGSDAF KYNISAGMID QKGVLLGHRY KRFNGLANLS TTINKYITVG TNVSYMKGNS
LSPYYENQNF VLMTMTQSPL VKPYLPDGSG RYTDKAVPTG VGGSQNNRNP FWIANETYRD
YDDWQANVQG WLDVNFLQTE KMGLKWSSKY ASRFAEQFRN IYHYGADAFY YLPENEYTAG
GANVYQKGTP FGPEALGVNQ GNFRTLLNTF YSSLNWNWNP GRHDIALMVG YSQEEQKYRW
LGGTRNVFPV KNMYELDGMG PLNQTTTGGL TEWAFQSLFG RATYALASKY LLEANFRYDG
TSRIYKDSRW GFFPSASAGW RISEEAFIRD GASWIDNLKL RASYGLLGNA NIGEYRVGNT
NLGEYPWQDT YVATTYAFNE ALGQGVQQTA FRNRGLKWEK TTIADIGLDF NLKSDLIYGT
IDWYNKVTTG ILAGAIIPAS AGMSAPVINY GTLRNYGLEL ELGHKGKFGQ VEYGINGQVS
VNRNKVIKFP APAYSDRIIM EGLPYRDYYL YEYTGLFKSE EELKAVVTPG NPQLGDIKFK
DQNNDGKIDG DDRIRVKGAY PGFIYSFGGN VRWKNFDLAL FFQGVQGQKV RTFFFGEDPF
SQGSSPHPKF LDAYDPVTNP DSEVPAIYGW GYAPMTGGTA QNSTYFLKDA SYLRLKNVQI
GYTIPTSVTK KVGINHLKVF VTGDNILTFT KYPDLDPERA GDGWHAQYPQ LKVYSVGLNL
RF
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