Gene Dfer_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1546 
Symbol 
ID8225117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1847184 
End bp1847996 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content56% 
IMG OID644929404 
Productglycosyl transferase family 2 
Protein accessionYP_003085956 
Protein GI255035335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.151048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.921915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCTG CTCCGGCAAC ATCGCTTATT ATCGCTACTT ATAACTGGGC GGAAGCGCTG 
CATTGCAGCC TTTTGAGTGT ATTGAAGCAA AAAACGCTGC CCCTGGAAGT GATCATCGCC
GACGATGGCT CCGACCACCG GACGCGCGAC CTCATCGCGC GCATGCAGCA AATATTTCCC
GTGCCTGTCA TCCATGTGTG GCACGAAGAC CGGGGGTTCC GCAAGAGCGA AATCCTGAAC
AGGGCTGTTC GGCAGACTTC CGGCACTTAC ATAGTTCAGG TGGACGGCGA TGTGGTGCTG
CACGCCTCGT TCATTCAGGA CCATATTGCC GCGGCCGAAT GCGGCGCCTT CGTGCGCGGT
ACCCGCGCCA GGCTCAACCC TGCCAGAACC GAGGAGCTCC TTAAAAGTTC AGAGGCGGAA
ATGCGGAAGA CAAACTTCCG GTTCTATTCC CGCGGAGTCG ACAACCGCCT CAATGCGGTG
CGGCTGCCGG TGTTCCGGTC GCTCGGGCAG CGCAGGGAAA TGAAAAGCCG CAGTGTACGC
GGCAGCAACC TGGCCTACTG GAAAGACGAT TTTCTGCGTG TGAACGGCTA CAACAACGAA
TTGAGCGGCT GGGGCCATGA GGACGAGGAG CTCGCGGCGC GGTTTATCAA TAACAATATC
ATTAAAAAGA TCGTGAAACT CAGCGCTGTG CAATACCACC TGCACCACGA CGAGCTGCCC
CGCTCCAACG AGCCGTTCCA TCGCGAGGCC GTACAACAAA CCCTGCTAAC AAAAGTTAAA
AAATGCCTGA ATGGATATGA AAACCTTCTC TAA
 
Protein sequence
MGSAPATSLI IATYNWAEAL HCSLLSVLKQ KTLPLEVIIA DDGSDHRTRD LIARMQQIFP 
VPVIHVWHED RGFRKSEILN RAVRQTSGTY IVQVDGDVVL HASFIQDHIA AAECGAFVRG
TRARLNPART EELLKSSEAE MRKTNFRFYS RGVDNRLNAV RLPVFRSLGQ RREMKSRSVR
GSNLAYWKDD FLRVNGYNNE LSGWGHEDEE LAARFINNNI IKKIVKLSAV QYHLHHDELP
RSNEPFHREA VQQTLLTKVK KCLNGYENLL