Gene Dfer_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1545 
Symbol 
ID8225116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1845412 
End bp1846566 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID644929403 
ProductCytochrome-c peroxidase 
Protein accessionYP_003085955 
Protein GI255035334 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.16368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAG CGGGCATTGC CTTTCTGGCC TGCGGCGGAG AGCGGAATAC GGCACTTAAA 
AAAGAGAAAG AACCCGTAGA AACGATTGCC GACCTGGGTG CATTGCCGCT GTCGGCGGAA
AGCCCGGCCG ATAATCCTAC GACGGTGGAA AAGGTAGGGT TAGGGCGCTT GCTGTTTTTT
GATCCGATAC TCTCCGGAAA TAAGGATGTG GCCTGCGCAA CCTGCCATCA GCCGGAGTTC
AACTATGCCG AATTTCTGGA AACGTCCATT GGCGTGAACG GCGTCGGTAG GGGGCAAAGC
CGCCGGTTTG TCGACCCGAA CGACATTCCC TTTGTGAAAA GAAATTCGCA GAGTGTGCTC
AATACCGCCT TCAACGGCAT TCGGAATAAT GAACCGTACG ATCCGGCACA GGCCCCGATG
TTTTGGGACA TGCGTGCCAA AGGCCTCGAA CAGCAGGCGC TCGAACCGAT TAAAACACTG
GAAGAAATGC GGGGAAACGG CTTCCATGAA ACCGGTATCG TGGAAGAAGT TGTAACGAGG
GTCGCAAAGA TTCCCGAATA CCGCCGGCTG TTTTCGGAGG CATTTCCCGG CGATCCCGCG
CCCGTCAGCC AGCTGAATCT CGCACGCGCC ATCGCGGCCT ATGAGCGCAC GCTGATCGCC
ACCAACACGC GTTTCGATCA GTACATGCGG GGCGATAGCA ATGCATTGTC CACCGGGGAG
AAGGAGGGAA TGAATGCTTT CCTGGTCACG GGTTGTGCCA AATGCCATTC CGGTCCGATG
TTCTCGGATT TCAAACTGCA TACCCTGGGC GTGCCCGATA CCGAAAACAG GAAGGAAAGC
GATTCCGGCG CCGATCAGAA ATATGCATTC AGGACACCCA CACTTCGCAA CCTGCGCTTC
ACGGCGCCGT ATATGCACAG CGGCAAGTTC CAGACGCTCG ATCAGGTGCT GATGTTTTAC
GAAGACATAG CCGGAGGTAA GCTGCTCAAT CCCAATGTGA AATCAGGGCA GGTAGATCCG
CTCGCCACGC ATATGGACGT TAATTTCAAG GACATTTCGC GGATCGTCGA GTTTTTGAAC
ACACTCAACG ACGACTCGTT CGATAAAACC ATCCCCGAAA GCGTTCCAAG CGGATTGCCG
GTAATGGGGC GTTAG
 
Protein sequence
MAGAGIAFLA CGGERNTALK KEKEPVETIA DLGALPLSAE SPADNPTTVE KVGLGRLLFF 
DPILSGNKDV ACATCHQPEF NYAEFLETSI GVNGVGRGQS RRFVDPNDIP FVKRNSQSVL
NTAFNGIRNN EPYDPAQAPM FWDMRAKGLE QQALEPIKTL EEMRGNGFHE TGIVEEVVTR
VAKIPEYRRL FSEAFPGDPA PVSQLNLARA IAAYERTLIA TNTRFDQYMR GDSNALSTGE
KEGMNAFLVT GCAKCHSGPM FSDFKLHTLG VPDTENRKES DSGADQKYAF RTPTLRNLRF
TAPYMHSGKF QTLDQVLMFY EDIAGGKLLN PNVKSGQVDP LATHMDVNFK DISRIVEFLN
TLNDDSFDKT IPESVPSGLP VMGR