| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1535 |
|---|
| Symbol | |
|---|
| ID | 8225106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1834979 |
|---|
| End bp | 1837216 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644929393 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
|---|
| Protein accession | YP_003085945 |
|---|
| Protein GI | 255035324 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC AACCCGTGGT AGGAAAGCCG GTAAGCAGGC TCGAAGGAAA ACTGAAAGTG
ACCGGGGCCG CCCAATACGC GGCCGAGTAT GACGCGCCGG GGCTGTTGTA TGGCTACGTC
GTCAATGCCA CCATTACGAA AGGGCGGATC GTGCGCGTGG ATACCAGCAA GGCAATGGCC
TTGGAAGGCG TGGTGGAAGT GCTCACGCAC GAAAACCGCC CGGATGTGGC GGCCATGGAC
ATTAAGTACA TTGATATGGA TGCGCCGCCC GGATTGGTTT TCAAGCCTTT GCGTGACACC
GATGTGAAGT ACAACGGTCA GCCGGTAGCG ATGGTAATTG CCGAGGATTT CGAAACCGCC
CGGTACGCCT CGACGCTCGT GCATTTCGAT TATGAAGAAG AGCCTTTCGA CACTTGTCTC
GACCACAATC TGGACAAAGC CCGCGACCCC GGTAAAGGTT TTGCAACCAT GCTGAAACCA
CCTCCGCCAG CCCCGACCGG TAATTTTGAA CAGGCGTTCC AGAATTCACC TTTCAAAGTC
GATTCGGAAT TCCGGCATGG CAGCGAGCAC CATAATCCGA TGGAATTGTT CGCGACCACC
ACCGTTTATG AAAGCGACGG GAAGCTTACG ATTTATGATA AAACGCAGGG GACGGTGAAT
AATCAGCTGT TTGTGGCGAA TGTATTCGGG CTGCCATACA AGGATGTGCG CGTGCTCGCT
CCGTTCGTGG GCGGCGCATT CGGCTCGGGA TTGCGGCCGC AATATCAGCT TTATCTGTGC
GTAATGGCGG CATTGCACCT CAAACGGAGC GTTCGGCTGG TGTTGGAAAG AAAGCAAATG
TTTCCATTCG TACACAGGCC GCAAAGCTAT CAGCGGCTGC GCTTCGCGGC CGATGCGAAC
GGAAGCCTTA CGGCATTGAA CCATTCGGCC GTATCGGAAA CGTCGCAGTT TGAGGACTAC
GCCGAAGTGG TGGCCACGTG GAGCCACAAA CTTTACCCCG CACCGAACAC GCTTTTTGAA
TACAAACTCG TCCCGCTGGA CCTTTACACC CCGCTGGACA TGCGCGCGCC CGGAGGTGTG
ACAGCCCTGC ACGCTATCGA ATGCACGATG GATGAGCTGG CGCACGAGGC GGGCATCGAC
CCGCTGGAAT TCCGGCTAAG AAATTATGCC GAAACGGACC CTACCACCGG CAAGCCGTTT
ACCAGCAAGG CGCTGCGGGA ATGTTATATC AAAGCCGCCG AAAAGTTCGG TTGGAAAGAT
CGCAATCCTG AGCCCGCAAG CATGAGGCGC GGTAACAAGC TGGTCGGCTA CGGAATGGCT
ACCGGCGCCT GGGACGCCTA CCAGTTTCCC GCACGGACGG AGGCCGTGAT CACCAAAGAA
GGCAAGCTCG TAGTGAACAG CGCCGTCACG GACATCGGGA CCGGCACGCT CACCGTCATG
ACGCAGATCG CCGCCGATGA GATGGGAATG CCGCTGGAAG ACGTCACATT CCGCTATGGA
GATAGTAAAA AGCCGTTTTC CATGTTTCAG GGAGGCTCGT CCATGACCGC CTCCACCGGC
GTGGCTATCC AGGCGGCGAT AAAGGCTTTG AAGAAGCGGT TGTTAAAAAA GGCCAAGCGA
ATGGACGGCT CGCCGTTCGG CAGCGCGGGC GACGACGATG TGGCGTTTAA GGACGGCCGG
ATGTTCATGA GAAGCCGCGC TTCGACGTTC GTTTCGTTCC AGGAAATCGT AGCGGCGCAG
GGCGGCAAGC CCATCAAGGC CACCGGAACC GGTGTTCCGC ACGTTTTGAA ATTGAGAAAA
TATACCAAAA TGACCCATAG CGCGGCTTTT GTGGAAGTGG AGGTGGATAA AGACCTGAAA
ACGATCACCG TCACCCGGGC CATCACCGCC GTAGCCGCAG GCCGCATTAT TAACCCAAAA
ACTGCGCGCA GCCAGATCGC CGGCTCGATG GTTTGGGGCG TTAGCAAAGC CTTGCACGAG
GAGACAATCC TGGATGAAAA GCTGGGTAAA TACATGAATT CCAATCTCGG CGAATACCAC
ATTCCGGTGC ATGCGGATAT CAACGAACTC GACGTGATTT TTGCCGACGA AAAGGATGAG
CTCATCAATG AGCTGGGGGT GAAGGGCGTG GGAGAAATAG GGCTGGTAGC AATGCCCGCC
GCGATTGCGA ACGCCGTGTT TCACGCCACG GGCAGGCGCA TCCGCGAGCT GCCGATCCAT
TTTGACAAGC TTTTGTGA
|
|---|
| Protein sequence | MKIQPVVGKP VSRLEGKLKV TGAAQYAAEY DAPGLLYGYV VNATITKGRI VRVDTSKAMA
LEGVVEVLTH ENRPDVAAMD IKYIDMDAPP GLVFKPLRDT DVKYNGQPVA MVIAEDFETA
RYASTLVHFD YEEEPFDTCL DHNLDKARDP GKGFATMLKP PPPAPTGNFE QAFQNSPFKV
DSEFRHGSEH HNPMELFATT TVYESDGKLT IYDKTQGTVN NQLFVANVFG LPYKDVRVLA
PFVGGAFGSG LRPQYQLYLC VMAALHLKRS VRLVLERKQM FPFVHRPQSY QRLRFAADAN
GSLTALNHSA VSETSQFEDY AEVVATWSHK LYPAPNTLFE YKLVPLDLYT PLDMRAPGGV
TALHAIECTM DELAHEAGID PLEFRLRNYA ETDPTTGKPF TSKALRECYI KAAEKFGWKD
RNPEPASMRR GNKLVGYGMA TGAWDAYQFP ARTEAVITKE GKLVVNSAVT DIGTGTLTVM
TQIAADEMGM PLEDVTFRYG DSKKPFSMFQ GGSSMTASTG VAIQAAIKAL KKRLLKKAKR
MDGSPFGSAG DDDVAFKDGR MFMRSRASTF VSFQEIVAAQ GGKPIKATGT GVPHVLKLRK
YTKMTHSAAF VEVEVDKDLK TITVTRAITA VAAGRIINPK TARSQIAGSM VWGVSKALHE
ETILDEKLGK YMNSNLGEYH IPVHADINEL DVIFADEKDE LINELGVKGV GEIGLVAMPA
AIANAVFHAT GRRIRELPIH FDKLL
|
|---|
| |