Gene Dfer_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1533 
Symbol 
ID8225104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1832648 
End bp1833913 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content59% 
IMG OID644929391 
Productprotein of unknown function UPF0261 
Protein accessionYP_003085943 
Protein GI255035322 
COG category[S] Function unknown 
COG ID[COG5441] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCT CTGGTTATAC TTGCATTATG TCAATTCCAG ATAAAAGCAT TTTAATACTC 
GGCTGCTTTG ATACTAAGGG AGAAGTGTTT TCCTACCTGC GGCAAAGCAT TATCGCGGGC
GGCGAAAGCG TTATCGCCAT CAATACCGGC GTTTTCGGCA GTACAGAAGC ATTTCCGGTG
GAGTTTGAAG CGGACTTCGT TGCGGAGGCC GCCGGCGACA GCATTACCGC TCTCCGTCAC
CACCGCGACC GCGGCAAGGC GATCGACGTC ATGGGCCGCG GTGCAGCCCG GCTTGTTTCG
CAGCTGTTTG CCGATGGCAA GATCAAGGCC GTCGTAGGAA TGGGCGGCGG AGGCGGCACG
TACATCGCGC TGTCGGCTAT GCAGGGACTT CCTTTTGGTT TGCCAAAAGT CTGTCTTACC
ACCCTGGCCA CGAAGGACCT GTCGCGGCAG ATCGGCGACA AGGACATTAT GCTCATTCCA
TCGGTGGTGG ATGTGGCGGG CATGAACCAC ATCCTGCGGC AACTGGTAGC GCAGGCCGCC
GCAGCGGTGT GCGCGATGGC CAATGTGGAA ACGGCCGGTT CGGACACAAA ACCACGCAGC
ATTGCCATCA GCATGTTCGG CAACACCACT GCGTGTGTCG ATAAATGCAC CGAGCTCCTC
GCCGAAGCGG GCTTTGAAGT GCTCGCATTC CATGCCACGG GCGTAGGCGG CAAAACCATG
GAATCGCTGA TCCGCGAGGG CTGTTTCGAC GCCGTGCTCG ATATTACCAC TACCGAATTG
GCCGACGATC TCTGCGGCGG CATTTGCAGC GCCGGCCCGG AGCGGCTTAC GGCCGCCGCC
GATATGGGCA TTCCGCAAAT CGTAGTACCG GGATGTATGG ATATGGTCAA TTTCGCTCAC
CTCGATACCG TCCCACAGGC ATTCGCAGGC AGGCACCTGT ACAGCTGGGC GCCCGACGTG
ACGCTCATGC GTACGGACGA GCGCGAGAAC GCAATCCTCG GCGAACGCCT CGCGAAAAAA
GTGAGCGCCT CGCCGGCACC GGCGGCGATT GTGCTTCCGC TGCGGGGCAT TTCGCAGGTA
GCATCGGAGG GTGGCATTTT CTACCACCCG GCGGCAGATG CAGCGTTGTT CGGCGCAATC
CGGGCGCACG CAGCCCCTCA CGTGACTTTG CTCGAAGCCG ATACGCATAT TAATGACCCG
GTGTTTGCAC ATTTGCTGGT AGAAACGCTA CTCGGGCTGA TGGCACAGCA GGAAACAATC
AACTAA
 
Protein sequence
MPISGYTCIM SIPDKSILIL GCFDTKGEVF SYLRQSIIAG GESVIAINTG VFGSTEAFPV 
EFEADFVAEA AGDSITALRH HRDRGKAIDV MGRGAARLVS QLFADGKIKA VVGMGGGGGT
YIALSAMQGL PFGLPKVCLT TLATKDLSRQ IGDKDIMLIP SVVDVAGMNH ILRQLVAQAA
AAVCAMANVE TAGSDTKPRS IAISMFGNTT ACVDKCTELL AEAGFEVLAF HATGVGGKTM
ESLIREGCFD AVLDITTTEL ADDLCGGICS AGPERLTAAA DMGIPQIVVP GCMDMVNFAH
LDTVPQAFAG RHLYSWAPDV TLMRTDEREN AILGERLAKK VSASPAPAAI VLPLRGISQV
ASEGGIFYHP AADAALFGAI RAHAAPHVTL LEADTHINDP VFAHLLVETL LGLMAQQETI
N