| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1531 |
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| Symbol | |
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| ID | 8225102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1829264 |
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| End bp | 1831195 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929389 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003085941 |
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| Protein GI | 255035320 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.963114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTTG CTGTTTCTCT TGCCGACTTT ATTACCCGCT ACCCATCCAT GCATTTGAAT
TACGACCTGA TTTTCCGTAG CTGCTCCGAG GGAATCTTTG TGTTGGACGA AACAGGAAGA
ATCACCGCGT GCAATGCAGC CGCAAGCGCG ATTACAGGCT ACGATGACAC CGATCTTGAA
TGCAAGCCGT TTTTTACCAT CGGCGACGGC CAGGACGATC CGATCAAATA CCGCTACGAG
CTCGACCAGG CACTCAAAAA GAAATCGCTC GTTGTAGAAG GGTGGAAGTT GAAAAAAGAC
CAGACCCGTT ATTGGGCCGA GACTTCCTAT TCACCGTTAT TCGATGATTT TCAAAAACAT
GTGGGGTTTT GTGTGCTGAT GCGCGATATC ACGGAAAAAA AGCAGCACCA GTTCCAGCTG
CTCCAAAGCG AGGAACGCTA CCGGCTCATG GTGGAGGCTA TCCGCGACTA TTCTATTTTT
ATGCTCGACC CCGAAGGCCA TGTGATCACC TGGAACGACG GCGGCACTTT TGTGCATGGT
TACGCCGAAA GTGAGATTCT CAACAAGCAT TTTTCCGTAT TCTATTCCGC ATCCGATGTC
ATCGACGACA AGCCGCGAAA GGCATTGCAA ACAGCCAGCG AAAGTGGCTC GTACCGCGAG
GAAGGGTGGC GTGTGAAGAA GGATGGCTCG CTGTTTTGGG CAAATGTGGT GTTGACCGCG
CTCTACAACG ACCGCAACAA ATTGATCGGC TACTCCAAAG TTACCCGCGA CCTGACCGAC
CGGCTGAAAA GTGAGGACGT CCTACGGCAA AGTGAAGCCC GCTATCGTTC GCTCGTGGAA
CAAGTAGGCG ACTACGGCAT ATTCATGCTC GACATCCGGG GCCGGATCAT CAGCTGGAAC
GAAGGCGCCC GGCGGATCAA GGGTTACAGC GCCGACGATG TGATCGGAAA GTATTTCTCG
ATATTTTATC CCGAAGAGGA CATTCTGAAC GGAAAACCTG CCTGGGAACT GAAAGTGGCG
CGCGCTACCG GCAAATATGA AGAAGAAGGT TGGAGGCTGC GGAAGGACGG AAGCCGCTTT
TGGGCAAATA TCGTCATCAC GGCCGTGTAC GACACCGAGG GCAGGCTGAG CGGATTTTCC
AAAGTTACCC GCGACCTCAC CGAGCGGAAA ATGAATGAGC AGGCATTGCA GGAAAGCTCC
GACAGGTACA AGCAGCTCGT GGACGAGCTT TCGGTCACGA ACAGCGAACT GTCCTCCGTC
AACCGCGAGC TCGAACAGTT TACGGCCATT GTTTCCCATG ATTTGAAAGA ACCCGTGCGG
ACGGTCCGCA GCTTCCTGCA CCTGATGGAC CGGCATGTCG ACCAGCAAAA CTATGATAAC
CTGCGGCTGA GCATTGGCAA AGGTATCCTC GCCGCCCAGC GAATGCACGA TCTGATCGAT
AATCTGCTTC ATTACTCGCA GATCAGCAAG GTGGGGCTGC AACGGCAGAA GCTGAGAGTG
GAAGAAGTGA TCGGGGAGGC GATCCAGAAC CTCGACGACG CCGTTGCGCA ATCGGGCGCG
AAAATACAGG TCGAGAGCCT CGTGCCATTC ATTTATGGCG ACCGTGTGCA GTTGGTGCAG
CTTTTCCAGA ACCTGGTCGC GAATGCATTG AAATTCACCA ACGGCAGCAC GCCGGAGGTG
ACCGTGAAAT CCTGGATGGA GAATGGAAGC GTGCGGTTTG TGGTGTCGGA CAATGGCATC
GGCATTTCAC CTGAAAACCT GGAAAAGATC TTCGAGATAT TCAGAAGGCT GCATTTTGCG
AACCAATATC CCGGCCACGG CGTCGGGCTG GCCGTTTGCA AGAAAGTGGT GGAGCGCCAC
AGAGGACGGA TCTGGGCCGA GTCGGCGCAG GGAAAAGGCG CCAGTTTCCA TATTTTGTTA
CCCAAGATTT AA
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| Protein sequence | MIFAVSLADF ITRYPSMHLN YDLIFRSCSE GIFVLDETGR ITACNAAASA ITGYDDTDLE
CKPFFTIGDG QDDPIKYRYE LDQALKKKSL VVEGWKLKKD QTRYWAETSY SPLFDDFQKH
VGFCVLMRDI TEKKQHQFQL LQSEERYRLM VEAIRDYSIF MLDPEGHVIT WNDGGTFVHG
YAESEILNKH FSVFYSASDV IDDKPRKALQ TASESGSYRE EGWRVKKDGS LFWANVVLTA
LYNDRNKLIG YSKVTRDLTD RLKSEDVLRQ SEARYRSLVE QVGDYGIFML DIRGRIISWN
EGARRIKGYS ADDVIGKYFS IFYPEEDILN GKPAWELKVA RATGKYEEEG WRLRKDGSRF
WANIVITAVY DTEGRLSGFS KVTRDLTERK MNEQALQESS DRYKQLVDEL SVTNSELSSV
NRELEQFTAI VSHDLKEPVR TVRSFLHLMD RHVDQQNYDN LRLSIGKGIL AAQRMHDLID
NLLHYSQISK VGLQRQKLRV EEVIGEAIQN LDDAVAQSGA KIQVESLVPF IYGDRVQLVQ
LFQNLVANAL KFTNGSTPEV TVKSWMENGS VRFVVSDNGI GISPENLEKI FEIFRRLHFA
NQYPGHGVGL AVCKKVVERH RGRIWAESAQ GKGASFHILL PKI
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