Gene Dfer_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1523 
Symbol 
ID8225094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1821062 
End bp1822126 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content55% 
IMG OID644929381 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003085933 
Protein GI255035312 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTATT TCAAGAGCTT CCTGGAAGTG GCCGGCGTGC TGATCGTCAT GATGTCGCTT 
ATTCCCCTGA TCCGGAGCGA TTACTGGACA TTCCGGGTTT TCGAATACCC GCGGTTGCAG
AAACTCGTCC TCTGCGTGGC TGTCACCGGC ATTTACATTA GTCTGTTTTT CTCGACCGAT
TTGCAGACAC TCATCCTGTC GGGTGCCTTC CTATTAAACA CCATTTATTT GTGCTACCTC
GTGTACCCGT TTACGCGCCT TGCGGGGACT GTGATCGAGC CTGCCAAGAA GCACTTGCCC
GAAAACCGCC TGTCGATCCT TTCATCGAAT GTATTTCAGG ACAACCGGAA TACCGAGGGC
TGCATGAACC TGATCCGGAA GTACGATCCC GACGTGCTGC TGCTGCTGGA AACCGACCGT
TTCTGGCATG AAAGCACGCT GGCATTGCAA AAGGACTATC CGTACGAGGT GCCGGTGCCG
CTGGAAAACA CCTATGGAAT GCTGCTCTAC TCGAAATTGG AGCTGTCGGA TGTGCAGGTC
CGCTACCTGG TCGACGAAGA AATACCTTCC ATTAAAGCGC AGGTCGCATT GCCCTCGGGC
CAGCGGATAC AGCTGTTTTG CGTGCACCCG ACGCCGCCCG TGCCCGGAGA AAACCTGCAT
TCCACCGAGC GCGACAAGGA ACTGCTGCTG GTAGCTAAGG AGGTTAAAGC CAGCCGGTTA
CCCTGCATTG TGGTGGGCGA CCTGAACGAC GTGGCGTGGT CCTACACCAC CGATCTTTTT
ACCAAAATCA GCGGCCTGCT CGATCCGCGC ATTGGGCGGG GTTTTTACAA TACCTTCCAT
GCGGGTATGC CGCTGCTGCG TTTCCCGCTC GATCACGTGT TTTGTTCCAC CGATTTCAAG
CTGGTAGAAC TCGCGCGGCT CGAAAATTTC TCATCCGACC ATTTCCCTAT CCTGCTTTCG
CTACAATATG AGCAGGCGGC AAGTGCGGAG CAGGAAGAGC CCGAGGCCGA ACCGGAGGAC
ATTGAGCTCG CCAACGAAAA AATCTCGAAG GAAGTGCCCG AGTGA
 
Protein sequence
MHYFKSFLEV AGVLIVMMSL IPLIRSDYWT FRVFEYPRLQ KLVLCVAVTG IYISLFFSTD 
LQTLILSGAF LLNTIYLCYL VYPFTRLAGT VIEPAKKHLP ENRLSILSSN VFQDNRNTEG
CMNLIRKYDP DVLLLLETDR FWHESTLALQ KDYPYEVPVP LENTYGMLLY SKLELSDVQV
RYLVDEEIPS IKAQVALPSG QRIQLFCVHP TPPVPGENLH STERDKELLL VAKEVKASRL
PCIVVGDLND VAWSYTTDLF TKISGLLDPR IGRGFYNTFH AGMPLLRFPL DHVFCSTDFK
LVELARLENF SSDHFPILLS LQYEQAASAE QEEPEAEPED IELANEKISK EVPE