| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1521 |
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| Symbol | |
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| ID | 8225092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1816855 |
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| End bp | 1820160 |
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| Gene Length | 3306 bp |
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| Protein Length | 1101 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929379 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003085931 |
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| Protein GI | 255035310 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.285241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTATACTACT TGCGTGGGCG GTGCCTGCGC TTGCCTGGGG GCAGTCACCC
GCTTTGCAGC AAGGCTTCCA AACGCCTCCC GATGCGGCTA AACCGCGTGT TTGGTGGCAT
TGGATGAACG GCAACATTAC CAAAGAAGGG ATCACCAAAG ACCTCGAATG GATGAAGCGC
GTAGGCATTG GCGGCTTCCA GAATTTCGAT GCGAGCCTTT TTACACCCAA TGTGACGCCC
AAAAAGCTGG TGTTCATGAC GCCCGACTGG AAGGACGCTT TCAAACATAC CACCGACCTC
GCCCAAAAGC TCGGCCTCGA AATGGCGATC GCAGGCTCAC CCGGTTGGAG CGTTACCGGC
GGGCCGTGGG TACCGGCCGC AGATGCGATG AAAAAGTACG TTTGGACCGA AACGCATGTG
CCGGGCGGGC AAACTTTTAC AGGCAAACTC CCCCCGCCCG CACCGGTGGC CGGGAAGTTT
CAGAATGTGC CATTGCCTGC CGAAGGCGGG ATGTCAGGAC CGTCGGGCGA AGTGCCGGAT
TATTATGCCG ATGCGCTCGT GATCGCCTAC AAGCTGCCTT CTGCCGACAA GCGCATGAGC
ACGCTCAATC CCAAAGTAAC GTCGAGCGGA GGCTCTTTTT CGGTAGCCGA ACTGACCGAC
GGCGATTTGG GCAAAACCTC CCTCCTGCCG CCGATGGAAG TTGGCCAGGA TATGTGGGTA
CAATATGAAT TCGATACACC GCAGACATTC AAGGCATTGA CGATTGTAGG CGCCAGCTCG
GGCGGCGCAT TGGCCGAGTT CAACGGAGCG CCCAACAACC GGACGCTGCG GGTAAGCGAC
GACGGCGTCA CTTTCCGCGA CGTTGCGCCC ATCAAAGGCA GCATTGTTCC TCAAAACACA
CTGGCATTTA CTCCCGTAAC GGCCAGATTC TACCGGATCG CGTTCAAAAC GCTGGCGCCG
CCGTTCAATC CTTTCGTAGC GATGATGGGC GGAGGCGGCG GGCAGCCGGC CGCGCCCGAG
GGCGTTCATG TGGCCGAAAT CGTGTTTCAT AATACCGACC GGATGGATCA GTTCGAAGAA
AAGGCTGGTT TCAGCCCCTG GCGCGAGAAT ACTTCCTCGC TGATCCAGCC CAATGCGGAC
GCGGTACCCC TCACCGACGT GATCGACCTG ACTTCCAAAA TGACCGCCGA CGGCAGCCTG
AACTGGACAC CGCCTGCCGG CAACTGGGTG GTGGTACGGC TCGGGTACTC GCTCACCGGG
CGCAAAAATC ATCCCGCCTC GCCGGAAGCA ACCGGTTTAG AAGTGGATAA GCTCGATAAA
GCAGCCGTGA CCCGCTATAT TAATACCTAT CTCGATATGT ATAAGGACGC TACCGGCGGG
CAAATGGGCG CGAAAGGACT GCAATTCATG GTGCTCGACA GCTACGAGGC AGGCCATATG
ACCTGGACGA AAGAAATGCC GCAGGAGTTC AAAAAGCGCC GAGGCTACGA CATCACGCCC
TGGATTCCCG CGCTCACAGG CATCATCGTG AAAAGCGCCG CTGAAAGCGA CCGCTTTTTG
TGGGATTTCC GAAAAACCAT CGGCGAACTG ATCATCGAAA ACCACTACGA GGTGATCGGC
GACGCATTGA AAGCGCGCGG AATGAAGCGC TATACCGAAT CGCACGAGGG CGGCCGCATT
TACCTGGCCG ACGGCATGGA TGTGAAGCGC AAGGCCGACA TTCCGATGGC TGCAATGTGG
ACGCCCGGCA GCCTGGCCGG GGGCGCCGAC GAGGAAGTGC GGAGCGAAGC CGACATCCGC
GAATCGGCCT CGGTGGCGCA CATTTACGGA CAAAACATCG TCGCGGCGGA ATCGATGACG
TCCGTTGGCA ATGCATTCAC CTGGTATCCC GAAAAGCTGA AACGCACGGC GGATCTCGAA
ATGGCGTCGG GACTGAACCG GTTTGTGATC CACACCTCCG TTCACCAGCC ACTGGACGAC
AAAAAACCCG GCTTTTCGCT CGGGCCGTTC GGGCAGTATT TCACGCGGCA GGAAACCTGG
GCAGAACAGG CAAAGGCGTG GATGGATTAC CTGGGGAGGA GCTGTTTCAT GCTGCAACAA
GGCAAGCCGG TGGTGGATGT GCTGTATTAT TATGGTGAAA ACTCAAATAT CACGCAGATC
TCCACGCAAA AACTTCCCCC GATACCTGCC GGCTATGCAT TCGATTTCGC GAATTCGAGT
GTGATCAAAG ATATGCTGAA AATAGAAAAA GGCTTGATCG CGACGCCATC GGGCCAGCAG
TATCGTTTGC TGGTGCTGGA CTCTACCGCC AGGGATATGA CATTGCCGGT GCTGCAAAAG
ATTGGCGAAC TGGTGGATAA CGGAATGAAA GTGGCGGGCG TGAAACCGGA GCGTTCCCCC
AGCCTGGGTG ACGATCCGTC GGCATTTACG GCGCTCGTCA ACAGGATTTG GAATAATCCG
AATGTTTCCT CGCAGCCGCT GGAAACCGTT TTGAGCAGCA TTGCGCCCAA AGATGTGGCC
ATATCCGGCG AGAAAGCGAA GATCCTTTAC GTGCACCGCC AAACACCCGA CGCCGACATT
TACTGGCTCG ACAACCGCAG TAACGAGGCC AACCAGGCCA GTATCAGCTT CCGCGTTACC
GGCAAAATTC CCGTACTATG GAACCCAGAA ACCGGCAAAA CCAGTAAAGT CTTTTACCAG
ATCGCCGACG GCCGGACCAC CATTCCTTTG AAATTCGATT CCTGGCAGGC CTATTTTATC
GTTTTCAGTG GCAAGGCTCC CAACAATTTG CATTCCGAGC CCGAATGGCG CGAATCGGAC
GCCACTGCTG TGACGGGCAC CTGGACCGTG CGCTTTCAAC CGGGCCTGGG CGCTCCTGCG
CAGGCGCAAA TGAATGAACT CGCCTCGCTA TCGGAGCATG CGGATGCCGG GATCAAATAC
TTTTCGGGAA CTGCCACTTA CGAAAACACG CTCAATGTGT CGGCAATTAA TAAAAAAGCG
CGCTACTGGC TCCACCTCGG CGATGTGAAA AATCTCGCCG AAGTGATCGT GAATGGCAAA
AATGCAGGCA TTATCTGGAA AAAGCCGTTC CGTATCGACA TTACCGACGC GGTGAAGCGG
GGCGCTAATA GCATTCAGGT GCGTGTTACC AATACCTGGG TAAACCGCCT GATCGGCGAC
GCACAACCCG GCACCGCCAC CAAAATCACT TATACGACGA TGCCGTTTTA CAAAGCCGAT
TCACCTTTAC AGCCCAGCGG CTTGCTGGGC CCGGTGAAAC TGGTGGCGGC AACGCCCGCA
AAATAG
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| Protein sequence | MKKLILLAWA VPALAWGQSP ALQQGFQTPP DAAKPRVWWH WMNGNITKEG ITKDLEWMKR
VGIGGFQNFD ASLFTPNVTP KKLVFMTPDW KDAFKHTTDL AQKLGLEMAI AGSPGWSVTG
GPWVPAADAM KKYVWTETHV PGGQTFTGKL PPPAPVAGKF QNVPLPAEGG MSGPSGEVPD
YYADALVIAY KLPSADKRMS TLNPKVTSSG GSFSVAELTD GDLGKTSLLP PMEVGQDMWV
QYEFDTPQTF KALTIVGASS GGALAEFNGA PNNRTLRVSD DGVTFRDVAP IKGSIVPQNT
LAFTPVTARF YRIAFKTLAP PFNPFVAMMG GGGGQPAAPE GVHVAEIVFH NTDRMDQFEE
KAGFSPWREN TSSLIQPNAD AVPLTDVIDL TSKMTADGSL NWTPPAGNWV VVRLGYSLTG
RKNHPASPEA TGLEVDKLDK AAVTRYINTY LDMYKDATGG QMGAKGLQFM VLDSYEAGHM
TWTKEMPQEF KKRRGYDITP WIPALTGIIV KSAAESDRFL WDFRKTIGEL IIENHYEVIG
DALKARGMKR YTESHEGGRI YLADGMDVKR KADIPMAAMW TPGSLAGGAD EEVRSEADIR
ESASVAHIYG QNIVAAESMT SVGNAFTWYP EKLKRTADLE MASGLNRFVI HTSVHQPLDD
KKPGFSLGPF GQYFTRQETW AEQAKAWMDY LGRSCFMLQQ GKPVVDVLYY YGENSNITQI
STQKLPPIPA GYAFDFANSS VIKDMLKIEK GLIATPSGQQ YRLLVLDSTA RDMTLPVLQK
IGELVDNGMK VAGVKPERSP SLGDDPSAFT ALVNRIWNNP NVSSQPLETV LSSIAPKDVA
ISGEKAKILY VHRQTPDADI YWLDNRSNEA NQASISFRVT GKIPVLWNPE TGKTSKVFYQ
IADGRTTIPL KFDSWQAYFI VFSGKAPNNL HSEPEWRESD ATAVTGTWTV RFQPGLGAPA
QAQMNELASL SEHADAGIKY FSGTATYENT LNVSAINKKA RYWLHLGDVK NLAEVIVNGK
NAGIIWKKPF RIDITDAVKR GANSIQVRVT NTWVNRLIGD AQPGTATKIT YTTMPFYKAD
SPLQPSGLLG PVKLVAATPA K
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