| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1518 |
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| Symbol | |
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| ID | 8225089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1813250 |
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| End bp | 1815814 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929376 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003085928 |
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| Protein GI | 255035307 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.388844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAT TTTTAACGAC CCTATTCAGC ACAACAATTC TACTCATCTC ATTGGTTGCC
CAGGCGCAGA ACCCGCCGAT CGTGAATGCC ACGGTTACCG GAACGATTCT CGACGCCGCC
ACCGACTCCC CGCTTATTGG TGCTACCGTC ACCATTAAGG GAACAACGAA CGGTGCCGCA
ACGGATGCAA ACGGTGAGTT TCAGCTGGTA ACGGGTCAGA AACTACCTTT CACACTGGTT
GTTTCGTTTT TGGGCTATAT CAAAAAAGAA GTTGTGATCG AAGGCAGCGG GGTGACTATC
AAGCTCGATC CTTCGGCGGA TAACCTGGAA GACGTGATCA TTTCGTCGCG TCGCCGTCAG
GAATCTGCTC AGGAAGTTCC CATTCCGATT TCCGTGATCC GCGGATCGGC CGCTGAGGAT
GCAGGTGCGT TCAATGTAAA CCGTTTGAAA GAACTGGTTC CGACCGTTCA GCTGTATGTG
TCGAACGCGC GTAATACAAC TTTGAACATC CGCGGCCTCG GATCTACCTA TGGCCTTACC
AACGATGGCA TCGACCCTGG CGTGGGTTTT TATGTGGATG GCGTTTACTA CGCACGTCCG
GCTGCAACGG CACTCGATTT CATTGATATT GAGCGCATTG AAGTATTGCG CGGACCACAG
GGAACACTTT TCGGAAAAAA CACGACGGCC GGCGCATTCA ACATCACCAC CCGCGGCGCG
AGCTTCGACC CCAGCGGCAG CTTCGAGCTA AGCTATGGTA ACTTCGGTTA CATTCAGGCC
AAAGGGTCAT TCACCGGCCC CATCAATAAG AAACTTGCGG CACGCGTGTC GTTCACGGGA
ACGCAGCGTA ATGGGCTGTT TTTCAACGAA CACACGCAAC AGCCGATCAA CGATATCAAT
AATATCGGTG TGCGCGGCCA GATTCTTTAC CAGCCAAACA GCAAGGTGAA CATTACCGTT
ATCGGCGACG TGTCGGATCA GAAACCAAAC GGCTACGGCT GGCCTATCGC AGGCGTGGTG
CCTACAAAAC GTGCGCCTTA CCGTCAATTC GACGCGATTA TCGCCGACCT GGGCTACAAA
CTCCCCTATT CAAGCGCATT CGAACGCAAA CTTGACCTTG ATACGCCTTC AAAAGCAGAT
AACAGACTTG GTGGCGTATC GGCCAACGCT GACATCAAAA TCGGAAACGG AACCCTTACC
GCAACTTCGG CATGGCGTTT CTGGAAATGG GTGCCCCTTA ACGACCGCGA TTACCTGGGA
TTGCCGGTAT TCACGATTTC GTCCGGTAAC TCGGTGCATG ACCAATGGTC GCAGGAGATC
CGCTATTCAG GCAAAATTTC CCCTAAACTC AGCGGTGTAG TTGGTTTGTT CGGACTTTGG
CAAGACCTGA AATCCGATCC TGTGCAAACG GAAGAGGCCG GTTCTGCACA GTGGCGTTTT
GCACAAAACA GCACCAGCGA ACTCTGGAAA ACACCGGGCT TGTTCGATAA CTTCGGTATC
CGCACCACCA ACCGCATCAA AAGCACCAGC CTTGCCGTGT TCGCACAGGC CGACTGGGCA
ATCACCGACA AGCTCCATGT ATTGCCGGGC GTTCGCTACA ACTACGACAA GAAAGTGGTG
GATTACAAAA GAGAGACTTA CGGCGGCCTG CAAACGACCG ACGCTGCATT GCTCGCGCTG
AAACGACTGG TTTACACGGA CCAGGCCTTC AACACGAACT ACGACCAGGG TAACTTTTCG
GGACAATTGT CGCTCCAATA CAAAGCCAGC AGCCGTTTCA ATGCCTATGC AACGTATTCG
GTGGGTTACA AGCCTATCGG CGTAAACGTG GGCGGCTTGC CGACAGCCAA TGGCGCTGTT
CTGCTCGACC TGGCTAATGT GAAGCCCGAG CACGTGGATC ACAAAGAGTT GGGTATCAAA
ACAAAACCGA CTGCTAACTC CGTCCTGAAC CTGACCTTGT ACCGTTCGGA CATCAACGAT
TTCCAGACCC AGGTTCAGAC TCCCGAGCCG GGCGTAAACC GCGGCTATCT TGCCAATGCT
GAAAAAGTGC GGGTACAAGG CGTGGAAGTA GATGGTAACA TTCGATTCAG CAACCTGTCG
TTCAATGCGG CGGTGGCTTA TACCGACGGA AAATATGTCA AATTCGCCAA TGCACCCGTG
CCTTTGGAAG AAGTAGGCGG TGAGCAGGCA TTCAAGGATA TTTCGGGCGG TGCGCTGCCG
GGCATTTCGA AATGGTCGGG CTCCGTAGGG GGTGAAGGAA CGGTGAAAGG CACCTTCCTG
GGACTGAAAG GCAACTACTT CCTGGGTATC GACGTATTTG CGCGCTCCGG CTTCTCATCC
AGCCCATCAC CATCCAAATA CCTGAACATC GACGGCTACT CGCTGACCAA CGGCCGCCTC
GGTTTCCGCG CCTCGAACGG CATTTCGTTC TTCGTATGGG CCAGAAACGT GTTCAACAAA
GACTACTACG AACTGCTCCT GGCAGCACCG GGCAGCTACG GCCAGTACGC CGGCATCGTG
GGCGACCAGC GCACCTACGG CGTCACATTG CGCTACTCGT TCTAA
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| Protein sequence | MKTFLTTLFS TTILLISLVA QAQNPPIVNA TVTGTILDAA TDSPLIGATV TIKGTTNGAA
TDANGEFQLV TGQKLPFTLV VSFLGYIKKE VVIEGSGVTI KLDPSADNLE DVIISSRRRQ
ESAQEVPIPI SVIRGSAAED AGAFNVNRLK ELVPTVQLYV SNARNTTLNI RGLGSTYGLT
NDGIDPGVGF YVDGVYYARP AATALDFIDI ERIEVLRGPQ GTLFGKNTTA GAFNITTRGA
SFDPSGSFEL SYGNFGYIQA KGSFTGPINK KLAARVSFTG TQRNGLFFNE HTQQPINDIN
NIGVRGQILY QPNSKVNITV IGDVSDQKPN GYGWPIAGVV PTKRAPYRQF DAIIADLGYK
LPYSSAFERK LDLDTPSKAD NRLGGVSANA DIKIGNGTLT ATSAWRFWKW VPLNDRDYLG
LPVFTISSGN SVHDQWSQEI RYSGKISPKL SGVVGLFGLW QDLKSDPVQT EEAGSAQWRF
AQNSTSELWK TPGLFDNFGI RTTNRIKSTS LAVFAQADWA ITDKLHVLPG VRYNYDKKVV
DYKRETYGGL QTTDAALLAL KRLVYTDQAF NTNYDQGNFS GQLSLQYKAS SRFNAYATYS
VGYKPIGVNV GGLPTANGAV LLDLANVKPE HVDHKELGIK TKPTANSVLN LTLYRSDIND
FQTQVQTPEP GVNRGYLANA EKVRVQGVEV DGNIRFSNLS FNAAVAYTDG KYVKFANAPV
PLEEVGGEQA FKDISGGALP GISKWSGSVG GEGTVKGTFL GLKGNYFLGI DVFARSGFSS
SPSPSKYLNI DGYSLTNGRL GFRASNGISF FVWARNVFNK DYYELLLAAP GSYGQYAGIV
GDQRTYGVTL RYSF
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