Gene Dfer_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1517 
Symbol 
ID8225088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1812583 
End bp1812993 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content53% 
IMG OID644929375 
Productresponse regulator receiver protein 
Protein accessionYP_003085927 
Protein GI255035306 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.678502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.344007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA ATACTGTAAT AATTGCTGAT GACGATGCGG ATGACCGCTA TCTGATCGGA 
GAAGCGCTGA ACATCGTGGG TCAGCGGAGG AAAATACTGG AAGTTGAGGA CGGCCGCGAA
CTGGTGGACC TGCTCGCGAA CGACAATCCC AATCCCGAAC TGATCCTGGT AGATATGAAT
ATGCCGCGGA TGAACGGCGT GGAAGTGCTG GACGCGATCC AGGCGTTTGC AGGCTACGGC
GATGTGCCCA AAATTGTCCT TTCGAATGAT AGCCAAAATG CCCAAAAAGC CTACCAGGCC
GGCGCCGACG GCTTCTACAC CAAGCCCGTC ACACTCGATG GTTACCTGGA CGTAGCCCGA
AGAATCCTGA AAAAATACCT CGGCGGAGAG CCACCCAAGC CATTGATTTA A
 
Protein sequence
MKRNTVIIAD DDADDRYLIG EALNIVGQRR KILEVEDGRE LVDLLANDNP NPELILVDMN 
MPRMNGVEVL DAIQAFAGYG DVPKIVLSND SQNAQKAYQA GADGFYTKPV TLDGYLDVAR
RILKKYLGGE PPKPLI