Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1516 |
Symbol | |
ID | 8225087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1810565 |
End bp | 1812226 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644929374 |
Product | sulfatase |
Protein accession | YP_003085926 |
Protein GI | 255035305 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.943825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.893122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACCT CTGCATTCTT TGCCGCTGCG CTGTTTGCCT TTTCGGCCGT GGCGGCGCAA AAGAAATCCG CCCCGGACCG CCGGGTTGCC GACCAGCGGC CCAACATCAT CCTCATCATG GTCGACGACC TGGGCTACTC CGACATCGGC GCATACGGCT CCGAGATCAA AACCCCGCAT ATCGACCAGC TCGCCGGCGA GGGCATCCGG TTCCGCGAAT TTTATAACAA TTCCATCTGT GCGCCCACGC GGGCGTCGCT CATCACCGGC CAGTACCCGC ACAAGGCCGG AGTGGGATAT TTTAATGTAA ATCTGGGCCT GCCGGCTTAC CAGGGGTATC TCAACAAGGA GTCGCTCACA TTCGGGGAAG TGCTGCGCAA TGCGGGTTAC AGCACCTTGC TGAGCGGCAA ATGGCACGTC GGGAACGACA GCACCGCGTG GCCCAACCAG CGCGGGTTTG ATCGTTTCTA TGGTTTCATC AATGGGGCAA GCAACTATTT CGATATTGGA AAATACGGCA AAGGCCCGGC TGTGGAGCTG GTGGAGAACA ATAAGCGCAT TAACCTGCCG CCCGACAAAT ACCTGACCGA CGAGATCACC GATCACGCCC TCGCATTCCT CGACGAGCAA AGCAAAACCG CCAAGCCGTT TTTCCTTTAC CTCGCCTACA ATGCGCCGCA CTGGCCGCTG CAAGCCCCGG AAGCGGATAT TGCCAAATAC AAGGGCCGGT ACAGCATCGG CTGGGACTCG CTCCGTGCCG AGCGCCTGCA AAGGCAGAAA GCGCTGGGCA TTACCGATCC CAAACAATCC GTGGCGGCGC GCGACAAGGA CGTGACGCCC TGGGAGAATG TGCCATATGA TGAAAAACTG CTTTGGGAGC GTAAAATGGA GATTTATGCG GCGATGGTCG ATCGGGTGGA CCAGAATATA GGCAAGCTTC GCGAAAAACT GAAAGCGCTT AACAAAGACG ATAACACGCT GATTGTCTTC ATTTCCGACA ATGGTGCGCA GGGTGGTTAC GCGGGCGCAT CTCCGCGCAG GCCACAGCGC AACACCGGCC CGGCGGGCAC GGCAGGTTCG TATGTGTATC AGGACCAGCC CTGGGCGTAC GTGTCAAACG CACCGCACGC CGCATATAAG AACAACATGC ACGAAGGCGG TATCAGCGCG CCATTCATTG CCTGGTTTCC CCGGCAGATC AAAGGCGGGC AGATCGTGAA GGGCACCGGC CACCTGATCG ACCTTGCGCC GACGTTCTAT GATCTTGCCA AAGCCGCCTA TCCGGCCACA GCGAATGGTG TTGCTACGAA TACCCTTCCG GGCAAAAGCC TGGTGCCGGT ACTCACGGGT AAATCGGGCG AGGTGGACCG TGGCGGCGAG CCTATCTTTT GGGAACGCGC CGGAAACCGG GCTGTGAGGA AGGGGAAATG GAAAATCGTG TCAACCTACC CGGCCTACAA ATGGGAGCTC TACGACCTCG AAACCGACCG CGGCGAAACG AGCGATGTGG CCTCCGCCAA CCCGAATGTA GTGGACCAGC TCGCTGCCGA CTACTTTCGC TGGGCGGAAA AAACGGGTGT AGTGGAATAT GACAAAATCA AGCCCGCTAC CCCCATCGGC GCCCCGGCAC CCCGTCCGAA CCGCGCCCCG CCTACTTTTT GA
|
Protein sequence | MKTSAFFAAA LFAFSAVAAQ KKSAPDRRVA DQRPNIILIM VDDLGYSDIG AYGSEIKTPH IDQLAGEGIR FREFYNNSIC APTRASLITG QYPHKAGVGY FNVNLGLPAY QGYLNKESLT FGEVLRNAGY STLLSGKWHV GNDSTAWPNQ RGFDRFYGFI NGASNYFDIG KYGKGPAVEL VENNKRINLP PDKYLTDEIT DHALAFLDEQ SKTAKPFFLY LAYNAPHWPL QAPEADIAKY KGRYSIGWDS LRAERLQRQK ALGITDPKQS VAARDKDVTP WENVPYDEKL LWERKMEIYA AMVDRVDQNI GKLREKLKAL NKDDNTLIVF ISDNGAQGGY AGASPRRPQR NTGPAGTAGS YVYQDQPWAY VSNAPHAAYK NNMHEGGISA PFIAWFPRQI KGGQIVKGTG HLIDLAPTFY DLAKAAYPAT ANGVATNTLP GKSLVPVLTG KSGEVDRGGE PIFWERAGNR AVRKGKWKIV STYPAYKWEL YDLETDRGET SDVASANPNV VDQLAADYFR WAEKTGVVEY DKIKPATPIG APAPRPNRAP PTF
|
| |