| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1515 |
|---|
| Symbol | |
|---|
| ID | 8225086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1809689 |
|---|
| End bp | 1810486 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644929373 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003085925 |
|---|
| Protein GI | 255035304 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACACG AGGCACACTA CATTCATCCC GACCTGAAAA TATCCGGATT TACGGAACAT
TTTCAAAAGA GCGACGTGCT GTTCGAATCG CATTTGCTGG TTTGGTTTAT TTCGGGTGAG
ACGAAGATCA TACAGGGCGG ACAGGCGCAT ATTTTCGGAG CCGGTGACAC GCTTTTCTTT
CCACGCCACG AGCTGGTGAC GGTGATTAAC TATCCCAAAA ACGGCCTCCC GCACCGATCT
GTCGTCATGC ATTTGACCGC CCCGCGGCTC GAAGCCTATT ATGCGAAAAA CAAAGTGGAT
GTGAAGCCCG TGCCCAGGCC CGGATTCAGG ACATTTGAAA AGCATCCGCT CCTGCAAAGC
TGCATGGCCT CGCTCGTCCC CTATTTTGAC CTGCGCGAAG CACTGCCGGA AGCACTCGCG
GGCATGAAGA TCGAGGAGGC CATTACCATT TTGCGGACCA TCGAGCCGGA AATTGACCAC
TTCCTGGCCG ACTTCGGCGA GCCGGGTAAG ATCAATCTGG TCGATTTTAT GGAGCAACAC
TTCATGTACA ACCTCCCGAT GACCAAGTTT GGCTACCTTA CCGGTCGCAG CCTCACGACT
TTTAAGCGGG ATTTTAAGAA AACCTACCAA ACCACGCCGC AAAAGTGGCT TACCGAAAAA
CGGCTGGCCC TGGCCCATTA CCTCATCCGC GAGAAGAAAC GGCGACCGTC GGAGGTGTAT
CTGGAAGTCG GTTTCGAAAA CCTGTCGCAT TTCGGATATG CATTTAAAAA GCATTTTGGC
TACGCACCTA CGGATTGA
|
|---|
| Protein sequence | MAHEAHYIHP DLKISGFTEH FQKSDVLFES HLLVWFISGE TKIIQGGQAH IFGAGDTLFF
PRHELVTVIN YPKNGLPHRS VVMHLTAPRL EAYYAKNKVD VKPVPRPGFR TFEKHPLLQS
CMASLVPYFD LREALPEALA GMKIEEAITI LRTIEPEIDH FLADFGEPGK INLVDFMEQH
FMYNLPMTKF GYLTGRSLTT FKRDFKKTYQ TTPQKWLTEK RLALAHYLIR EKKRRPSEVY
LEVGFENLSH FGYAFKKHFG YAPTD
|
|---|
| |