| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1489 |
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| Symbol | |
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| ID | 8225060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1772438 |
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| End bp | 1776652 |
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| Gene Length | 4215 bp |
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| Protein Length | 1404 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929348 |
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| Product | histidine kinase |
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| Protein accession | YP_003085900 |
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| Protein GI | 255035279 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.639294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.537564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAA AAGTGGCTAT GCGGGTGATG AAACGCATAT TTTCAAATTT ATTGATCGTT
TTGCTCGCGG CGATCTGCTG GCTGCCGGCA GTTGGGAATG CGGCGGACCC TGCGGCGGGG
CGCGTGCTGC GCTATTCCAT CGGTGAAGGG CTTTCTTTCG GCGTGGTGAA CAGCATGACG
CAGGACAACG ACGGGCTCAT GTGGTTCGCG ACGGGCGACG GCGTGAGCCG GTTCGATGGC
ACCACGTTCC GCAATTACAA ATACGACCGC AGCGATCCGC ACAGCTTGCC GGGTAATTAT
GTCAAATCCA TTCTCCGCGA TAAGGACGGC ACGATCTGGG TGTCCTCGCG CGACGGGATC
GGAGAATTTT TACCTGCCAA GCAGCAATTC AATCGATATA AACCATTCCA AAACCAGAAC
GGCGCCGGAA ACGACGTGAG CGACATCAGC CAGGGAGGCG GCAATAGTCT GTGGCTGGCG
CTGAACGGCT CCGGTTTCGC TTCGTTCAAC ACCCAAAATC ATCAATTTAC CCTCTATAAC
CAGCAAACGC TGCCTGGGCT TTTTACCAAT TCCATCCTGA ATGTGTTCGA AGATTCACAG
GGAATGCTGT GGCTCGGCTC CCGCGACAGC GGCATTGAGG TCTGGAAAAA AGGCGGGTCG
GGCAAGCTGG TGAAAGTCGC ATTCAATTTA AACAATGTGC CTTCGGCGAG GGTCAATGCG
ATTTACGAAG ATCACCTGCG CAACGTCTGG ATCGCATCTT CCCGCGGGTT GATCCTCTTC
AAGCGGAGCG AAGGCCGCTT TTACGACTTG CATATCGATA CATTCCATCA CAGCGACATC
TACCTTTCGG TAATCGAAGA CCACCGGCAA AACCTGCTCA TCGGCGTGCA GGACGGCGGC
ATTTACAGGC TCGCATTGGA TCAGGTAGCG TCGCGGCCGG CGGAAGCCCT CATTTTTGAA
CCGGTTCGGG ATAAGGACAA TAAAGGTATT ACGCAGCGTT CGGTGCAGTC GCTTTATATT
GATAAGGACC GCAACGTATG GCTCGGCACG TACGGGGAAG GCACTTTCCT GATGAGCGCT
ATTCCCGAGA AATTCAGGAA GTTCGAGCAA AAAACGATCG ATTCCCGCGC CGAAGGATAC
TTGCGCTACT ACGGCATGTG CGCGGACAAG GACGGCAACC TGTGGATTGG CACCGATGGC
GATGGCATTT TCAAAACCAC GGCCTCAGGC GAGGTATTAA AGCATTATGC CGCGTCCGCA
AAACCCGGCC AGTTACCGGA TGGTGCCGTA ATCGCCGCGC ACCGCGACCG CCAGGACCGC
CTGTGGTTCG GGACTTATTC CAAAGGATTG GTGCGGTACG ACCCCGCCAC GGATACTTTT
AAACGCTACG CCCACGATCC TGCCGACCCG CATTCCCTCG GGAGAAACGA CGTGCGGGTG
ATTTACCAGG ACAAGCGTAA AAATGTATGG GTAGGCACCA ATGGGGGCGG ACTGGGGCTG
CTCGATGAGC GGACGGGTAA ATTCCGCAGT TTCGTGCCAT CCAACAGCTC CATCAATGCC
AACGACGTCC GTGCCATTAC CGAGGACAAG TATGGCAACC TGTGGATCGG GACTTATGGC
GGCGGGCTCA ACTACCTCAA TACCCGCACG ATGCAGTTCG TTTCATGGTT CAATGAGGCG
GGGAAAGAGC CTTTTTTGTC CAACCGCATC ATATTTTCCC TTTACATGGA CCCGCTCGAC
CGGCTATGGA TAGGGTCGGA GGGTAATGGG CTGCTGCTGT TCGACACGCG CGCCAAATCG
GTCCGCTACT TTGATGAAAA GCGCGGGCTT GCAAGCAATG TGATCAATGC CATCCAGCCC
GAGGGTACGG ACAAGGTTTG GGTGAGCACC GACAAAGGCC TGTCGCGGAT CAGCGCACGC
ACGGGCGCTA TCGAGAATTT CGATACCAGC CACGGCTTGC AGGGCGGGCA GTTCAACCCT
GGTTCTACAT TATTCAATGC CAAAAGCGGC CTGATGAGCT TCGGCGGAAC AGAGGGCTGG
AACCTCTTCG ACCCGGCAAA AGTGAGCGCA TCGCGGTACC AGCCGAAGGT GATGATCAGC
GGAATGCGCA TTTTCGGCAA AGACAAGGAA GGTAACGAGC CGGTTTCGCT TTTCGAATAC
CTGGGCAAAG CGCGCCGGTT CACCATCCGG CCCGGTCAGC CGATCTTCAC GATTGATTTT
ACGGCATTAA ACTACGCCTA CCCGGAGCTG ACCCGCTACG CCTATATGCT GGAAGGGCTC
GATAAGGATT GGAACTATGT ACAAAATGAG CGATCGGCAA CCTACCGTTA TTTGCCGTCG
GGGAATTATG AGTTCAAGGT AAAAGTGGCC AACCAGGACG GGGTTTGGTT TGATGACTAC
GCTTCGTTGC CGATCCGTGT GATGCCGCCC TGGTACCAGA GCTGGTGGGC GTACATGCTG
TACATTCTGA CGGTCGGCGT GGTACTTTAC TATTACCAGC AATACAAGCT CGGGCAGGAG
AAGATGAAGT ACGAAGTTCA GCTCGCGCAG CTCGAAACGC GCCAGCAAAT CGAACTGAAT
GAGCGCAAGT TTTCGTTTTT TACCAATGTA TCGCATGAGT TCCGCACGCC GCTTACATTG
ATTATCAACC CGATCCGGGA AATGATGCAG GCCGCGGGCG CGGATGCCAC TTCGCCGAGC
ATGCACATCA TTTACCGCAA TGCGAAGCGG CTACTCAGCC TGGTGGACCA GCTGCTGCTT
TTCCGCAAGG CCGACCAGCA AACCGACCAG CTCAAACCCG CCGCTCATCA CCTGCCACAG
CTTATTACAG AAGTATTTCA ATGCTTCCTG CACCAGGCCG AGCAGAAGCA CATCCGCTAC
GAGCTCGCCC TCCCGGAAGC GGAGCTGGAA GTGATTTGTG ATTGGGAAAA AATTGAAATA
GCCGTATTTA ACCTGATTTC AAATGCATTG AAATTCACGC CTGAACATGG CACTGTGAAT
GTGCAGGTGG TTGATATGGG CGAGCAGGTG GAGATCGTCG TGAGCGATAC CGGCCCGGGC
ATCCCGGCGG ATGCGGGCGA TGACATTTTC AAGGTGTTTC ACCAGTACGC CGACCGCCGT
TTTGCGGCCA AAGGTGGTTT TGGAATTGGA TTATACCTGG CTAAAACCTT TGTAGAAAAC
CATTTCGGAA CGCTGCAATA TGAGTCGGAG CTTGACCGCG GCACGACGTT CCGGGTGCTG
CTGTGGAAGG CCCATCCGGG GCTGGCTTCC GGTGCCGTTG CGGGCGAAGC GCGCGACTCG
GTGTTGCTGG AAGAACTGTC CGATGGCGTG CTGCCCGTGA AAGCACCCGC CTTGCCCGAC
TGGCAGAGCG AGTTACTCGA CATGAAGGAG CCCTCGCCCG GCATTTATAC GATGCTTGTG
GTGGACGACG ACCCGGAGAT CCGGCAATAC CTTTCGACGG TGTTCGCGGG AAAGTACAAA
ATATTCGAAG CCGGGAGCGG GGAGGAGGGG CTGGAACTTG TGCGCAAACA TTTGCCCGAT
ATCGTGATCA GCGATGTGAT GATGGGCGGC ATTTCAGGCA TTGAATTGTG CCGGCAGATG
AAGCTCGATA TGGCATTGAG CCACATTCCG GTGATCCTGC TCACGGCAAG CACCTCCCAG
GACGTCCGGC TCAAAGGCAT CGAAGGCGGG GCCGACGACC ATATCAGCAA GCCGTTCGAT
AACGGCATAC TCGTGGCCCG CGTGGCTTCC ATCCTGCGAA ACCGCAACGA TCTTCAACGG
TATTTCTACA ACGAAATCAC GCTGCAAACA AGCGATTTTA AGATTTCGGC GGAGTACCGG
GAGTTCCTCA CCGAATGTAT CCGCATTGTA GAAAGCCACA TTACCGACTC TGCTTTCAAT
ATAAAAGTGC TCGCTTCCGA GATCGGAATG AGCCATTCCA CGCTGTACAG CCGCATTAAG
TCCATTTCCG GCCAGTCGGC GACGAGCTTT GTCCGGTTCA TACGCCTGCG CAAGGCCGCG
CAGCTGCTGA TCACGACCGA CACGACGATC AGCGAAACGG CATTCAGCGT CGGCATTAAC
GACATCCGGT ATTTCCGGGA ACACTTCCAG AAATTGTTTG GAATGAAGCC TTCGGAATAT
GTGAAGAAAT TCAGAAAACC CTTCCACGAG CGTACGACGA TCGACAAGGA TATTTTCCGT
CAGAAATCCG TGTAA
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| Protein sequence | MSGKVAMRVM KRIFSNLLIV LLAAICWLPA VGNAADPAAG RVLRYSIGEG LSFGVVNSMT
QDNDGLMWFA TGDGVSRFDG TTFRNYKYDR SDPHSLPGNY VKSILRDKDG TIWVSSRDGI
GEFLPAKQQF NRYKPFQNQN GAGNDVSDIS QGGGNSLWLA LNGSGFASFN TQNHQFTLYN
QQTLPGLFTN SILNVFEDSQ GMLWLGSRDS GIEVWKKGGS GKLVKVAFNL NNVPSARVNA
IYEDHLRNVW IASSRGLILF KRSEGRFYDL HIDTFHHSDI YLSVIEDHRQ NLLIGVQDGG
IYRLALDQVA SRPAEALIFE PVRDKDNKGI TQRSVQSLYI DKDRNVWLGT YGEGTFLMSA
IPEKFRKFEQ KTIDSRAEGY LRYYGMCADK DGNLWIGTDG DGIFKTTASG EVLKHYAASA
KPGQLPDGAV IAAHRDRQDR LWFGTYSKGL VRYDPATDTF KRYAHDPADP HSLGRNDVRV
IYQDKRKNVW VGTNGGGLGL LDERTGKFRS FVPSNSSINA NDVRAITEDK YGNLWIGTYG
GGLNYLNTRT MQFVSWFNEA GKEPFLSNRI IFSLYMDPLD RLWIGSEGNG LLLFDTRAKS
VRYFDEKRGL ASNVINAIQP EGTDKVWVST DKGLSRISAR TGAIENFDTS HGLQGGQFNP
GSTLFNAKSG LMSFGGTEGW NLFDPAKVSA SRYQPKVMIS GMRIFGKDKE GNEPVSLFEY
LGKARRFTIR PGQPIFTIDF TALNYAYPEL TRYAYMLEGL DKDWNYVQNE RSATYRYLPS
GNYEFKVKVA NQDGVWFDDY ASLPIRVMPP WYQSWWAYML YILTVGVVLY YYQQYKLGQE
KMKYEVQLAQ LETRQQIELN ERKFSFFTNV SHEFRTPLTL IINPIREMMQ AAGADATSPS
MHIIYRNAKR LLSLVDQLLL FRKADQQTDQ LKPAAHHLPQ LITEVFQCFL HQAEQKHIRY
ELALPEAELE VICDWEKIEI AVFNLISNAL KFTPEHGTVN VQVVDMGEQV EIVVSDTGPG
IPADAGDDIF KVFHQYADRR FAAKGGFGIG LYLAKTFVEN HFGTLQYESE LDRGTTFRVL
LWKAHPGLAS GAVAGEARDS VLLEELSDGV LPVKAPALPD WQSELLDMKE PSPGIYTMLV
VDDDPEIRQY LSTVFAGKYK IFEAGSGEEG LELVRKHLPD IVISDVMMGG ISGIELCRQM
KLDMALSHIP VILLTASTSQ DVRLKGIEGG ADDHISKPFD NGILVARVAS ILRNRNDLQR
YFYNEITLQT SDFKISAEYR EFLTECIRIV ESHITDSAFN IKVLASEIGM SHSTLYSRIK
SISGQSATSF VRFIRLRKAA QLLITTDTTI SETAFSVGIN DIRYFREHFQ KLFGMKPSEY
VKKFRKPFHE RTTIDKDIFR QKSV
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