Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1486 |
Symbol | |
ID | 8225057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1765667 |
End bp | 1767301 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644929345 |
Product | glycoside hydrolase family 30 |
Protein accession | YP_003085897 |
Protein GI | 255035276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5520] O-Glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.291924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTT CCGCTCCCGG TGCCTCTGTC GCCGGGAGTT CTTTTTTCTT CCATTCCCTG ACAGACCTGT TCATGCAAAT TTCCCAACAC CTCGGAACGC TGTTCCTCGG GCTCCTCATG ACGTCGTCCA TGAGCTGCCA AGGCGCCGAA TCCGCCACCA AACCCGTTGA CCCGGTTCAG GAGACGGTCA CGATCCGCAT TGATCCATCC AAAACTTACC AGACCATCCG CCATTTCGGC GGTTCCGACG CCTGGGCCTG CCAGTTTGTA GGTAAATGGC CCCTGGCGAA GAAGAATGCC ATTGCCGACC TCCTCTTCAG TAAAGACACG CACAGCGACG GCCGTCCGAA AGGCATCGGC TTGTCGCTGT GGCGTTTCAA CGCGGGCGGC GGCACAGCCG AGCAGGGCGA TGCCAGCGGT ATCCGGGACG AATGGCGCCG CGCCGAGTCG TTTTTTGCTG CTGATGGCGG CTACGACTGG AACAAGCAGG AGGGCCAGAT GTGGTTCCTC CAAGCCGCCA AAGAACGCGG TGTGAATGAG TTCCTGGTTT TCCCGAACTC CCCGCCCGTG CAATTTACCA CCAATGGAAA AGGCTATGCT ACCAATGGTC AGCCGAACCT GCCCGCACAG CAATACGATA AGTTCGCCGG TTACCTGGCC GATGTGATCG ACGGCGTGCG CCGGAAAACG GGCATTACAT TTCAATACGT CAGCCCTGTG AACGAGCCGC AATGGGATTG GAGCGACGGA GGGCAGGAGG GAACACCTTA TTTCAACAAC CAGATCGCCG CCATTACCCG CTCGCTCAGC GCGGCGCTTT TGAAGAAGAA CCTGGCTACC AAAATCAACA TCGCGGAGGC GGGGCAGATC GACTACCTGT ATTCCGAGCA TAACCGGCCC GGACGCGCCA GCCAGGTCAC TGCGTTTTTT GACAAAAACA GCCCCGACTA CGTCTGTAAC CTGCCCAATG TGCTTCCGGC CATTTCGGGG CACAGCTATT TCACCACTTC TCCCTACAAA GCCGCTGCCG AGAAACGCCG GCAGCTGGCC GCCGCGGTTG CCAAAGTTCC CGGCCTAGAA TACTGGCAGT CGGAGTATTG CATTCTGGGT GATAATGAGG GGGAAATTAA GGGAGAGGGG CGTGACCTGG GCATCAATGC CGGGCTGTAC ATGGCGCGCG TGATCCACAA CGACCTTGTG AATGCGCAGG CAGCGGCATG GCATTGGTGG ATTTCTGTAT CGCCGTACGA CTACAAGGAC GGCCTGGTTT ACATTGATAA AAATAAAAAC GACGGCAGCT TTCAGTCCTC CAAAATGCTT TGGGCACTGG GCAATTTCAG CCGTTTCGTA CGCCCGGGTG CGGTGCGTGT GGATGTTTCG GGTGGCCTGG GCACGGACGC GATGGTCGTT TCTTCCTACC TGAACACCGA TAAGTCGCTG GTGACGGTGA TCGTGAATGC CGACAACCAG GACCGTGACA TCAGCCTTGC GATCAGCGGC GGGCAGCCGG CCGGTGCGGT AAGCGTTTAC GAGACATCGG CCGAGCATGA CCTCGCCCCG GTTCGGAATG CCGGTGCCGA CGGGCGCCTG GCTGTGAAGA AGCAAAGCAT TGTCACCATT ATCAGGCAAT TGTAA
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Protein sequence | MQISAPGASV AGSSFFFHSL TDLFMQISQH LGTLFLGLLM TSSMSCQGAE SATKPVDPVQ ETVTIRIDPS KTYQTIRHFG GSDAWACQFV GKWPLAKKNA IADLLFSKDT HSDGRPKGIG LSLWRFNAGG GTAEQGDASG IRDEWRRAES FFAADGGYDW NKQEGQMWFL QAAKERGVNE FLVFPNSPPV QFTTNGKGYA TNGQPNLPAQ QYDKFAGYLA DVIDGVRRKT GITFQYVSPV NEPQWDWSDG GQEGTPYFNN QIAAITRSLS AALLKKNLAT KINIAEAGQI DYLYSEHNRP GRASQVTAFF DKNSPDYVCN LPNVLPAISG HSYFTTSPYK AAAEKRRQLA AAVAKVPGLE YWQSEYCILG DNEGEIKGEG RDLGINAGLY MARVIHNDLV NAQAAAWHWW ISVSPYDYKD GLVYIDKNKN DGSFQSSKML WALGNFSRFV RPGAVRVDVS GGLGTDAMVV SSYLNTDKSL VTVIVNADNQ DRDISLAISG GQPAGAVSVY ETSAEHDLAP VRNAGADGRL AVKKQSIVTI IRQL
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